FFCP PHASE1:Hg19::chr2:161110384..161110395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3694 | |EntrezGene=3694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6161 | |HGNC=6161 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000498478_5end | |association_with_transcript=-24bp_to_ENST00000498478_5end | ||
|cluster_id=chr2:161110384..161110395,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_10_at_ITGB6_5end | |description=CAGE_peak_10_at_ITGB6_5end | ||
|id=chr2:161110384..161110395,- | |id=chr2:161110384..161110395,- | ||
|ontology_enrichment_celltype=CL:0000188!2.19e-23!9;CL:0000594!8.63e-11!3;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57 | |ontology_enrichment_celltype=CL:0000188!2.19e-23!9;CL:0000594!8.63e-11!3;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.07e-14;1!UBERON:0004874;2.25e-14;1!UBERON:0008814;4.23e-08;2!UBERON:0010056;4.23e-08;2 | |||
|ontology_enrichment_disease=DOID:4468!5.16e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.32e-13!61;UBERON:0002036!7.32e-13!61;UBERON:0003082!7.32e-13!61;UBERON:0002385!2.52e-12!63;UBERON:0001015!2.52e-12!63;UBERON:0000383!2.52e-12!63;UBERON:0003104!7.85e-11!238;UBERON:0009142!7.85e-11!238;UBERON:0004290!1.07e-10!70;UBERON:0000914!1.41e-09!83;UBERON:0002329!1.41e-09!83;UBERON:0003077!1.41e-09!83;UBERON:0003059!1.41e-09!83;UBERON:0007282!1.41e-09!83;UBERON:0009618!1.41e-09!83;UBERON:0007285!1.41e-09!83;UBERON:0000341!5.22e-09!2;UBERON:0001630!8.23e-09!2;UBERON:0005090!8.23e-09!2;UBERON:0000486!1.45e-08!82;UBERON:0005256!1.89e-08!143;UBERON:0002100!2.70e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;8.70e-28;2!UBERON:0001723;4.42e-19;3!UBERON:0001033;4.42e-19;3!UBERON:0002426;4.72e-15;1!UBERON:0003831;4.72e-15;1!UBERON:0003898;4.72e-15;1!UBERON:0004830;4.72e-15;1!UBERON:0003830;4.72e-15;1!UBERON:0005175;4.72e-15;1!UBERON:0001774;4.72e-15;1!UBERON:0001103;4.72e-15;1!UBERON:0007029;2.25e-14;1!UBERON:0000989;2.25e-14;1!UBERON:0008811;2.25e-14;1!UBERON:0001134;1.24e-13;16!UBERON:0002036;1.24e-13;16!UBERON:0000974;6.35e-10;6!UBERON:0005090;3.56e-08;2!UBERON:0001630;3.56e-08;2!UBERON:0003127;7.78e-08;2!UBERON:0000922;2.22e-07;49!UBERON:0002385;4.26e-07;31!UBERON:0001015;4.26e-07;31!UBERON:0000383;4.26e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,6.20e-28,2;UBERON:0001723,4.62e-19,3;UBERON:0001033,4.62e-19,3;UBERON:0010056,4.62e-19,3;UBERON:0002426,4.73e-15,1;UBERON:0003831,4.73e-15,1;UBERON:0003898,4.73e-15,1;UBERON:0004830,4.73e-15,1;UBERON:0003830,4.73e-15,1;UBERON:0005175,4.73e-15,1;UBERON:0001774,4.73e-15,1;UBERON:0001103,4.73e-15,1;UBERON:0010084,4.73e-15,1;UBERON:0000989,1.61e-14,1;UBERON:0008811,1.61e-14,1;UBERON:0006258,1.61e-14,1;UBERON:0005876,1.61e-14,1;UBERON:0004874,1.61e-14,1;UBERON:0007029,2.41e-14,1;UBERON:0005090,3.56e-08,2;UBERON:0001630,3.56e-08,2;UBERON:0003127,7.52e-08,2 | |||
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| ||
|short_description=p10@ITGB6 | |short_description=p10@ITGB6 | ||
}} | }} |
Latest revision as of 19:49, 17 September 2015
Short description: | p10@ITGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ITGB6_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -24bp_to_ENST00000498478_5end |
EntrezGene: | ITGB6 |
HGNC: | 6161 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 6.20e-28 | 2 |
tongue | 4.62e-19 | 3 |
gustatory system | 4.62e-19 | 3 |
future tongue | 4.62e-19 | 3 |
chest muscle | 4.73e-15 | 1 |
respiratory system muscle | 4.73e-15 | 1 |
skeletal muscle of trunk | 4.73e-15 | 1 |
respiratory system skeletal muscle | 4.73e-15 | 1 |
thoracic segment muscle | 4.73e-15 | 1 |
chest organ | 4.73e-15 | 1 |
muscle of trunk | 4.73e-15 | 1 |
diaphragm | 4.73e-15 | 1 |
future diaphragm | 4.73e-15 | 1 |
penis | 1.61e-14 | 1 |
intromittent organ | 1.61e-14 | 1 |
lateral plate mesenchyme | 1.61e-14 | 1 |
undifferentiated genital tubercle | 1.61e-14 | 1 |
somatopleure | 1.61e-14 | 1 |
surface | 2.41e-14 | 1 |
muscle structure | 3.56e-08 | 2 |
muscle organ | 3.56e-08 | 2 |
open tracheal system trachea | 7.52e-08 | 2 |