FFCP PHASE1:Hg19::chr15:45544426..45544451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9153 | |EntrezGene=9153 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11002 | |HGNC=11002 | ||
|TSSclassifier=strong | |||
|UniProt=O43868,Q2M2A7,Q53H72 | |UniProt=O43868,Q2M2A7,Q53H72 | ||
|association_with_transcript=0bp_to_ENST00000347644,ENST00000560438,NM_004212,uc001zva.2_5end | |association_with_transcript=0bp_to_ENST00000347644,ENST00000560438,NM_004212,uc001zva.2_5end | ||
|cluster_id=chr15:45544426..45544451,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_SLC28A2_5end | |description=CAGE_peak_1_at_SLC28A2_5end | ||
|id=chr15:45544426..45544451,+ | |id=chr15:45544426..45544451,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.92e-10!5 | |ontology_enrichment_celltype=CL:0002322!6.92e-10!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.30e-19;1!UBERON:0003124;5.62e-19;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.89e-13!35;UBERON:0000160!1.93e-11!27;UBERON:0000059!2.93e-08!11 | |ontology_enrichment_uberon=UBERON:0005409!1.89e-13!35;UBERON:0000160!1.93e-11!27;UBERON:0000059!2.93e-08!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.37e-38;22!UBERON:0000160;7.47e-36;17!UBERON:0002108;2.23e-33;4!UBERON:0004921;3.80e-23;33!UBERON:0001155;1.58e-18;9!UBERON:0000059;2.74e-15;11!UBERON:0001555;5.71e-10;54!UBERON:0002114;1.93e-07;2!UBERON:0002110;2.05e-07;3!UBERON:0000922;2.72e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.47e-36,17;UBERON:0005409,1.33e-33,25;UBERON:0002108,2.23e-33,4;UBERON:0001155,1.58e-18,9;UBERON:0000059,2.74e-15,11;UBERON:0004119,1.73e-08,160;UBERON:0000925,1.73e-08,160;UBERON:0006595,1.73e-08,160;UBERON:0001007,1.91e-07,145;UBERON:0001555,1.91e-07,145;UBERON:0007026,1.91e-07,145;UBERON:0002114,1.93e-07,2;UBERON:0002110,2.05e-07,3;UBERON:0006242,2.05e-07,3;UBERON:0004921,4.21e-07,118 | |||
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|short_description=p1@SLC28A2 | |short_description=p1@SLC28A2 | ||
}} | }} |
Latest revision as of 19:52, 17 September 2015
Short description: | p1@SLC28A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC28A2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000347644, ENST00000560438, NM_004212, uc001zva.2_5end |
EntrezGene: | SLC28A2 |
HGNC: | 11002 |
UniProt: | O43868Q2M2A7Q53H72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.47e-36 | 17 |
gastrointestinal system | 1.33e-33 | 25 |
small intestine | 2.23e-33 | 4 |
colon | 1.58e-18 | 9 |
large intestine | 2.74e-15 | 11 |
endoderm-derived structure | 1.73e-08 | 160 |
endoderm | 1.73e-08 | 160 |
presumptive endoderm | 1.73e-08 | 160 |
digestive system | 1.91e-07 | 145 |
digestive tract | 1.91e-07 | 145 |
primitive gut | 1.91e-07 | 145 |
duodenum | 1.93e-07 | 2 |
gallbladder | 2.05e-07 | 3 |
gall bladder primordium | 2.05e-07 | 3 |
subdivision of digestive tract | 4.21e-07 | 118 |