FFCP PHASE1:Hg19::chr4:42399551..42399563,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:42399551..42399563,+
|short_description=p2@SHISA3
|description=CAGE_peak_2_at_SHISA3_5end
|association_with_transcript=-292bp_to_ENST00000319234,NM_0010805...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152573 | |EntrezGene=152573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25159 | |HGNC=25159 | ||
|TSSclassifier=strong | |||
|UniProt=A0PJX4 | |UniProt=A0PJX4 | ||
|association_with_transcript=-292bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end | |||
|cluster_id=chr4:42399551..42399563,+ | |||
|description=CAGE_peak_2_at_SHISA3_5end | |||
|id=chr4:42399551..42399563,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002599;2.50e-10;1!CL:0002188;2.58e-08;5!CL:0002595;2.88e-08;5!CL:0002544;6.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002599,2.28e-10,1;CL:0002188,3.05e-08,5;CL:0002595,3.52e-08,5;CL:0002544,5.42e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.03e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!2.44e-09!69;UBERON:0003914!4.34e-09!118;UBERON:0007100!1.09e-08!27;UBERON:0001009!1.59e-08!113;UBERON:0004535!1.42e-07!110;UBERON:0004872!1.81e-07!84;UBERON:0000948!3.05e-07!24;UBERON:0005498!3.05e-07!24;UBERON:0004140!3.05e-07!24;UBERON:0009881!3.05e-07!24;UBERON:0004141!3.05e-07!24;UBERON:0003084!3.05e-07!24;UBERON:0007005!3.05e-07!24;UBERON:0004139!3.05e-07!24;UBERON:0004291!3.05e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;1.90e-12;7!UBERON:0002079;1.03e-10;1!UBERON:0003834;2.88e-08;5!UBERON:0001533;2.88e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003513,2.23e-12,7;UBERON:0002079,1.08e-10,1;UBERON:0003834,3.52e-08,5;UBERON:0001533,3.52e-08,5 | |||
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| ||
|short_description=p2@SHISA3 | |||
}} | }} |
Latest revision as of 20:14, 17 September 2015
Short description: | p2@SHISA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SHISA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -292bp_to_ENST00000319234, NM_001080505, uc003gwp.2_5end |
EntrezGene: | SHISA3 |
HGNC: | 25159 |
UniProt: | A0PJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the esophagus | 2.28e-10 | 1 |
glomerular endothelial cell | 3.05e-08 | 5 |
smooth muscle cell of the subclavian artery | 3.52e-08 | 5 |
aortic endothelial cell | 5.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
trunk blood vessel | 2.23e-12 | 7 |
left cardiac atrium | 1.08e-10 | 1 |
thoracic segment blood vessel | 3.52e-08 | 5 |
subclavian artery | 3.52e-08 | 5 |