FFCP PHASE1:Hg19::chr17:76210318..76210366,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:76210318..76210366,+
|short_description=p1@BIRC5
|description=CAGE_peak_1_at_BIRC5_5end
|association_with_transcript=0bp_to_ENST00000432014_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=332 | |EntrezGene=332 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=593 | |HGNC=593 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000432014_5end | |||
|cluster_id=chr17:76210318..76210366,+ | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_1_at_BIRC5_5end | |||
|id=chr17:76210318..76210366,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.82e-22!254;CL:0000548!9.38e-22!679;CL:0000004!9.38e-22!679;CL:0000255!9.38e-22!679;CL:0000012!2.72e-21!682;CL:0002321!1.06e-17!248;CL:0000220!4.02e-17!246;CL:0000003!9.35e-12!722;CL:0000055!1.83e-11!180;CL:0000144!5.40e-09!625;CL:0000222!2.70e-08!119;CL:0000333!3.96e-08!41;CL:0000133!5.45e-08!59;CL:0000076!6.41e-08!62;CL:0000063!1.75e-07!578;CL:0002319!3.12e-07!25;CL:0000221!5.80e-07!71;CL:0000213!6.35e-07!57;CL:0000215!6.35e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.66e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.86e-22,253;CL:0002321,1.13e-17,250;CL:0000222,1.73e-08,121;CL:0000333,3.81e-08,41;CL:0000133,6.52e-08,59;CL:0000076,1.17e-07,63;CL:0000213,2.34e-07,58;CL:0000215,2.34e-07,58;CL:0002319,2.76e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.55e-39!235;DOID:14566!1.35e-38!239;DOID:0050687!5.98e-21!143;DOID:0050686!1.92e-17!137;DOID:305!2.56e-15!106;DOID:2531!2.59e-13!51;DOID:0060083!2.59e-13!51;DOID:1240!1.05e-10!39;DOID:8692!5.00e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.08e-08;51!DOID:0060083;1.08e-08;51!DOID:1240;1.42e-08;39!DOID:8692;6.08e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.77e-40,235;DOID:14566,6.02e-39,239;DOID:0050687,3.93e-21,143;DOID:0050686,1.36e-17,137;DOID:305,1.90e-15,106;DOID:2531,2.01e-13,51;DOID:0060083,2.01e-13,51;DOID:1240,8.65e-11,39;DOID:8692,4.35e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!4.35e-08!238;UBERON:0009142!4.35e-08!238;UBERON:0000072!6.55e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;9.31e-07;24!UBERON:0011143;9.31e-07;24 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@BIRC5 | |||
}} | }} |
Latest revision as of 20:38, 17 September 2015
Short description: | p1@BIRC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BIRC5_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 0bp_to_ENST00000432014_5end |
EntrezGene: | BIRC5 |
HGNC: | 593 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.86e-22 | 253 |
embryonic cell | 1.13e-17 | 250 |
mesodermal cell | 1.73e-08 | 121 |
migratory neural crest cell | 3.81e-08 | 41 |
neurectodermal cell | 6.52e-08 | 59 |
squamous epithelial cell | 1.17e-07 | 63 |
lining cell | 2.34e-07 | 58 |
barrier cell | 2.34e-07 | 58 |
neural cell | 2.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.77e-40 | 235 |
disease of cellular proliferation | 6.02e-39 | 239 |
cell type cancer | 3.93e-21 | 143 |
organ system cancer | 1.36e-17 | 137 |
carcinoma | 1.90e-15 | 106 |
hematologic cancer | 2.01e-13 | 51 |
immune system cancer | 2.01e-13 | 51 |
leukemia | 8.65e-11 | 39 |
myeloid leukemia | 4.35e-08 | 31 |