FFCP PHASE1:Hg19::chr5:39462245..39462252,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1601 | |EntrezGene=1601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2662 | |HGNC=2662 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000509457_5end | |association_with_transcript=3bp_to_ENST00000509457_5end | ||
|cluster_id=chr5:39462245..39462252,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_50_at_DAB2_5end | |description=CAGE_peak_50_at_DAB2_5end | ||
|id=chr5:39462245..39462252,- | |id=chr5:39462245..39462252,- | ||
|ontology_enrichment_celltype=CL:0000148!2.89e-28!10;CL:0000541!2.89e-28!10;CL:0000147!3.38e-20!14;CL:0000710!3.97e-14!20;CL:0002566!1.11e-12!1;CL:0000075!1.93e-10!27;CL:0002077!1.61e-08!33;CL:0000325!3.47e-07!39 | |ontology_enrichment_celltype=CL:0000148!2.89e-28!10;CL:0000541!2.89e-28!10;CL:0000147!3.38e-20!14;CL:0000710!3.97e-14!20;CL:0002566!1.11e-12!1;CL:0000075!1.93e-10!27;CL:0002077!1.61e-08!33;CL:0000325!3.47e-07!39 | ||
|ontology_enrichment_celltype_v019=CL:0000148;5.27e-53;10!CL:0000147;4.09e-38;14!CL:0002566;5.97e-34;1!CL:0000710;6.34e-27;20!CL:0000075;3.89e-20;27!CL:0002077;1.15e-14;34!CL:0000149;1.17e-09;4!CL:0000235;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.61e-53,10;CL:0000541,4.61e-53,10;CL:0000147,3.72e-38,14;CL:0002566,7.06e-34,1;CL:0000710,5.93e-27,20;CL:0000075,3.71e-20,27;CL:0002077,3.79e-16,34;CL:0000333,6.71e-13,41;CL:0000149,1.12e-09,4;CL:0000133,2.94e-09,59;CL:0000221,1.02e-07,72;CL:0000235,9.49e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!4.37e-23!2;DOID:4960!3.45e-12!1;DOID:0070004!3.45e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;9.86e-18;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.07e-18,2 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.96e-15!3;UBERON:0004854!2.96e-15!3;UBERON:0009034!2.96e-15!3;UBERON:0002095!2.96e-15!3;UBERON:0004782!2.96e-15!3;UBERON:0003281!2.96e-15!3;UBERON:0009664!2.96e-15!3;UBERON:0002296!2.96e-15!3;UBERON:0005602!2.96e-15!3;UBERON:0001179!2.96e-15!3;UBERON:0006293!2.96e-15!3;UBERON:0004177!4.71e-07!7;UBERON:0003127!7.61e-07!2 | |ontology_enrichment_uberon=UBERON:0002106!2.96e-15!3;UBERON:0004854!2.96e-15!3;UBERON:0009034!2.96e-15!3;UBERON:0002095!2.96e-15!3;UBERON:0004782!2.96e-15!3;UBERON:0003281!2.96e-15!3;UBERON:0009664!2.96e-15!3;UBERON:0002296!2.96e-15!3;UBERON:0005602!2.96e-15!3;UBERON:0001179!2.96e-15!3;UBERON:0006293!2.96e-15!3;UBERON:0004177!4.71e-07!7;UBERON:0003127!7.61e-07!2 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p50@DAB2 | |short_description=p50@DAB2 | ||
}} | }} |
Latest revision as of 21:30, 17 September 2015
Short description: | p50@DAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_DAB2_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 3bp_to_ENST00000509457_5end |
EntrezGene: | DAB2 |
HGNC: | 2662 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.61e-53 | 10 |
melanoblast | 4.61e-53 | 10 |
pigment cell | 3.72e-38 | 14 |
dark melanocyte | 7.06e-34 | 1 |
neurecto-epithelial cell | 5.93e-27 | 20 |
columnar/cuboidal epithelial cell | 3.71e-20 | 27 |
ecto-epithelial cell | 3.79e-16 | 34 |
migratory neural crest cell | 6.71e-13 | 41 |
visual pigment cell | 1.12e-09 | 4 |
neurectodermal cell | 2.94e-09 | 59 |
ectodermal cell | 1.02e-07 | 72 |
macrophage | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
melanoma | 9.07e-18 | 2 |