FFCP PHASE1:Hg19::chr16:75301886..75301914,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:75301886..75301914,-
|short_description=p8@BCAR1
|description=CAGE_peak_8_at_BCAR1_5end
|association_with_transcript=36bp_to_ENST00000393422,NM_001170715,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9564 | |EntrezGene=9564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=971 | |HGNC=971 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCV2,B3KWD7,P56945 | |UniProt=E9PCV2,B3KWD7,P56945 | ||
|association_with_transcript=36bp_to_ENST00000393422,NM_001170715,uc002fdx.2_5end | |||
|cluster_id=chr16:75301886..75301914,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_8_at_BCAR1_5end | |||
|id=chr16:75301886..75301914,- | |||
|ontology_enrichment_celltype=CL:0000066!9.03e-37!254;CL:0002076!7.59e-17!43;CL:0000223!7.11e-14!59;CL:0002368!7.41e-12!13;CL:0000076!2.53e-11!62;CL:0002202!7.50e-09!9;CL:0002632!7.50e-09!9;CL:0002159!9.01e-09!13;CL:0000220!3.49e-08!246;CL:0002321!6.32e-08!248;CL:0000082!1.03e-07!19;CL:1000497!3.04e-07!18;CL:0002518!3.04e-07!18;CL:1000449!4.21e-07!16;CL:0000240!4.84e-07!6;CL:0000311!4.84e-07!6;CL:0000079!4.84e-07!6;CL:0000237!4.84e-07!6;CL:0000036!4.84e-07!6;CL:0000357!4.84e-07!6;CL:0000114!4.84e-07!6;CL:0002681!6.75e-07!13;CL:0002584!6.75e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.45e-18;13!CL:0002076;1.13e-17;42!CL:0002159;2.88e-14;14!CL:0002202;3.39e-13;9!CL:0002632;3.39e-13;9!CL:0000240;4.52e-12;6!CL:0000311;4.52e-12;6!CL:0000079;4.52e-12;6!CL:0000237;4.52e-12;6!CL:0000312;1.57e-09;5!CL:0002621;6.09e-09;3!CL:0000307;1.24e-08;3!CL:0002328;2.35e-08;3!CL:0000362;8.08e-08;9!CL:0002077;1.95e-07;34!CL:0002251;2.80e-07;20!CL:0002681;9.40e-07;12!CL:0002584;9.40e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.93e-23,253;CL:0002076,1.24e-21,42;CL:0002368,9.05e-18,13;CL:0000223,1.40e-15,58;CL:0002159,2.02e-14,14;CL:0002202,3.20e-13,9;CL:0002632,3.20e-13,9;CL:0002321,3.81e-12,250;CL:0000240,4.66e-12,6;CL:0000311,4.66e-12,6;CL:0000079,4.66e-12,6;CL:0000237,4.66e-12,6;CL:0000036,4.66e-12,6;CL:0000357,4.66e-12,6;CL:0000114,4.66e-12,6;CL:0000312,1.61e-09,5;CL:0002621,6.81e-09,3;CL:0002077,9.39e-09,34;CL:0002328,1.24e-08,3;CL:0000068,1.83e-08,3;CL:0000069,1.83e-08,3;CL:0000307,1.83e-08,3;CL:0000377,1.83e-08,3;CL:0000076,3.06e-08,63;CL:0000362,8.06e-08,9;CL:0002251,3.04e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000357;4.52e-12;6!CL:0000114;4.52e-12;6!CL:0000223;1.93e-09;58!CL:0000377;1.24e-08;3 | |||
|ontology_enrichment_disease=DOID:305!9.05e-13!106;DOID:0050687!4.40e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.33e-12!169;UBERON:0000925!1.33e-12!169;UBERON:0006595!1.33e-12!169;UBERON:0000464!1.00e-11!104;UBERON:0005177!3.48e-11!107;UBERON:0000466!3.58e-10!126;UBERON:0000475!3.74e-10!365;UBERON:0005157!5.85e-10!51;UBERON:0006554!2.38e-09!44;UBERON:0005153!2.42e-09!37;UBERON:0001007!4.02e-09!155;UBERON:0001555!4.02e-09!155;UBERON:0007026!4.02e-09!155;UBERON:0001004!5.28e-09!72;UBERON:0001008!6.11e-09!45;UBERON:0000062!6.85e-09!511;UBERON:0000481!8.66e-09!347;UBERON:0000467!1.56e-08!625;UBERON:0000480!1.96e-08!626;UBERON:0005178!3.47e-08!34;UBERON:0002224!3.47e-08!34;UBERON:0004921!3.96e-08!129;UBERON:0004185!3.96e-08!129;UBERON:0001041!4.91e-08!98;UBERON:0000483!6.91e-08!309;UBERON:0000923!7.62e-08!604;UBERON:0005291!7.62e-08!604;UBERON:0006598!7.62e-08!604;UBERON:0002532!7.62e-08!604;UBERON:0009569!9.28e-08!113;UBERON:0005181!9.48e-08!35;UBERON:0002050!9.50e-08!605;UBERON:0005423!9.50e-08!605;UBERON:0004802!1.03e-07!19;UBERON:0000115!1.03e-07!19;UBERON:0000064!1.19e-07!219;UBERON:0000468!1.23e-07!659;UBERON:0001851!1.27e-07!16;UBERON:0000119!1.50e-07!312;UBERON:0000065!2.10e-07!53;UBERON:0000077!2.24e-07!130;UBERON:0004807!2.38e-07!28;UBERON:0004121!3.47e-07!169;UBERON:0004211!4.21e-07!16;UBERON:0001285!4.21e-07!16;UBERON:0007684!4.21e-07!16;UBERON:0003220!4.21e-07!16;UBERON:0004208!4.21e-07!16;UBERON:0000922!4.24e-07!612;UBERON:0000924!6.05e-07!173;UBERON:0006601!6.05e-07!173;UBERON:0001225!6.75e-07!13;UBERON:0008987!6.75e-07!13;UBERON:0002113!6.79e-07!27;UBERON:0003918!6.79e-07!27;UBERON:0005095!6.79e-07!27;UBERON:0007687!6.79e-07!27;UBERON:0004111!7.42e-07!241;UBERON:0002048!9.17e-07!22;UBERON:0000117!9.17e-07!22;UBERON:0000171!9.17e-07!22;UBERON:0000170!9.17e-07!22;UBERON:0005597!9.17e-07!22;UBERON:0000118!9.17e-07!22;UBERON:0007196!9.30e-07!14;UBERON:0001558!9.30e-07!14;UBERON:0000058!9.48e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.09e-09;3!UBERON:0004815;2.35e-08;3!UBERON:0002031;2.35e-08;3!UBERON:0004807;7.40e-08;22!UBERON:0007196;1.79e-07;15!UBERON:0001558;1.79e-07;15!UBERON:0001851;3.11e-07;15!UBERON:0001905;4.87e-07;2!UBERON:0002757;4.87e-07;2!UBERON:0010134;4.87e-07;2!UBERON:0005408;4.87e-07;2!UBERON:0001899;4.87e-07;2!UBERON:0001225;9.40e-07;12!UBERON:0008987;9.40e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.81e-09,3;UBERON:0004815,1.24e-08,3;UBERON:0002031,1.24e-08,3;UBERON:0007196,1.73e-07,15;UBERON:0001558,1.73e-07,15;UBERON:0001851,4.57e-07,15;UBERON:0001905,4.89e-07,2;UBERON:0002757,4.89e-07,2;UBERON:0010134,4.89e-07,2;UBERON:0005408,4.89e-07,2;UBERON:0001899,4.89e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,4.18680700783456,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,1.83884244895785,3.91567694411725,2.58827807116751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,5.46442932438813,1.48313777113772,0,0,0,0,0,0,0,0,1.04142150482278,0,0,0.550236083880135,0.626984899610432,0.775250277507987,1.06729878806013,0.66944122552934,0,0,0.488124115096339,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,1.74437620857014,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,3.27295344709002,3.44165514466805,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,5.5972645558399,4.49607013030478,3.41798506199545,6.11083738046295,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0.790204397959275,3.43394464837949,0,0,0,0,2.18376766658517,1.98485136139341,0.985143749731331,1.45316969256981,4.21720947081732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,3.89894665610022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,2.20557117333613,3.49907757956406,0.114814448164607,0,0,0.902399225814824,0.462092022626489,0.784349769176855,0,0.211103257785751,1.13733384070897,0.340187410553031,0.215915916102139,0,1.35473218771926,1.00337954770971,1.01950509218015,0.831076008928724,1.79099803777743,0,0,0.512900250232778,1.31205858279882,0.325378394664303,0,0.0915694648183434,0,4.59412430396938,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0.178064071293475,0.495854746082934,2.30628080838127,1.27612712494584,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,2.11688647996127,2.01090682660736,3.26672954583968,0,1.72202149068492,1.68471475667626,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0.852408440419239,1.43246690842614,0,3.37876772309155,0,0.140669416410513,0.111308705022906,0,0,0,0,0.251932747854276,4.49982203009481,0,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,1.30213880542617,0.699679999969566,0,0.682760689712998,1.27126825146383,0.709163045303809,1.03423011972439,0.291604613383254,0,0,0.361789315876224,0,0,0,0.438770794307945,0,1.67308493134324,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,4.85295548414462,0.326465616318295,0,0,0,0,1.22206028986725,0,0,0,0.067401132980677,0,0.468528891450678,0,0.586993856796269,0.728341138602278,0,0,0,0.063186579628488,0.60129367765797,0.103688191397247,0.664653872707185,0.330991955875499,1.56966459203613,0,0.284609546029793,0.416024019039416,0,0.685946781900644,0.0870592065804026,0,0.343972064943233,0.0967563312890851,0.0730893170861856,0.164230914106418,0.387956065953678,0,0,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0,0.19980960958213,3.89044126316086,0,0,0,0.248505071130865,1.41416420770077,2.03856309110421,1.882851233622,0,0,0.600420288709789,0.136905378891993,0,0.859530882839914,0,0,0,0.717873024576814,0.199679000498991,0.429226048136571,0,2.5529719544956,0,0,0,0.0824158583811665,0.202210631562555,0.295282444544246,0,0,0,0.160753148465019,0,0,0,0,0.182248669974074,3.01891218839339,0.157611414598396,0.524545881349981,0.105600336519406,0,0.959575986597226,1.42939065274673,0,0,0.542999601753713,0,0,0,0,0,0.226624183040251,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0.138348634936231,0.624902039810533,0,0,1.41159491818903,10.3033679277514,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0.751288044986092,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,0,0,0,0,0.770479321629213,4.93215660162329,5.21988583930423,0,0,0,0,5.24962460173653,3.28926074368061,0.353378291891762,1.92914038270915,0.844712203265363,0.512483037175893,0.345430341731199,0,0.276516872303462,0,0,0,0,0,1.90180911022764,0,0,0,0,0,2.23807212351111,3.73246356019784,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0.578063025868136,0,0,0,0,0.829887029570615,0,0,4.02405645854205,0.11796972334774,0,0.577628330751691,0,0.690359926060101,0,0.150420656698515,0.20170506870352,0,0,0,0.295712172434091,0.202612753855184,0,0.206686796501184,0.19024743058172,0,0,0.992422356778588,0.175871244359621,0.127762427639595,19.2852660916183,25.2212791664118,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,0.0657727735628491,0.709163045303809,0.111231401892069,0,0.628462359664008,0.280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| ||
|short_description=p8@BCAR1 | |||
}} | }} |
Latest revision as of 21:33, 17 September 2015
Short description: | p8@BCAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_BCAR1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 36bp_to_ENST00000393422, NM_001170715, uc002fdx.2_5end |
EntrezGene: | BCAR1 |
HGNC: | 971 |
UniProt: | E9PCV2B3KWD7P56945 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.93e-23 | 253 |
endo-epithelial cell | 1.24e-21 | 42 |
respiratory epithelial cell | 9.05e-18 | 13 |
endodermal cell | 1.40e-15 | 58 |
general ecto-epithelial cell | 2.02e-14 | 14 |
epithelial cell of tracheobronchial tree | 3.20e-13 | 9 |
epithelial cell of lower respiratory tract | 3.20e-13 | 9 |
embryonic cell | 3.81e-12 | 250 |
stratified squamous epithelial cell | 4.66e-12 | 6 |
keratin accumulating cell | 4.66e-12 | 6 |
stratified epithelial cell | 4.66e-12 | 6 |
keratinizing barrier epithelial cell | 4.66e-12 | 6 |
epithelial fate stem cell | 4.66e-12 | 6 |
stratified epithelial stem cell | 4.66e-12 | 6 |
surface ectodermal cell | 4.66e-12 | 6 |
keratinocyte | 1.61e-09 | 5 |
gingival epithelial cell | 6.81e-09 | 3 |
ecto-epithelial cell | 9.39e-09 | 34 |
bronchial epithelial cell | 1.24e-08 | 3 |
duct epithelial cell | 1.83e-08 | 3 |
branched duct epithelial cell | 1.83e-08 | 3 |
tracheal epithelial cell | 1.83e-08 | 3 |
tracheoblast | 1.83e-08 | 3 |
squamous epithelial cell | 3.06e-08 | 63 |
epidermal cell | 8.06e-08 | 9 |
epithelial cell of alimentary canal | 3.04e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.81e-09 | 3 |
lower respiratory tract epithelium | 1.24e-08 | 3 |
epithelium of bronchus | 1.24e-08 | 3 |
tracheobronchial tree | 1.73e-07 | 15 |
lower respiratory tract | 1.73e-07 | 15 |
cortex | 4.57e-07 | 15 |
pineal body | 4.89e-07 | 2 |
regional part of epithalamus | 4.89e-07 | 2 |
secretory circumventricular organ | 4.89e-07 | 2 |
circumventricular organ | 4.89e-07 | 2 |
epithalamus | 4.89e-07 | 2 |