FFCP PHASE1:Hg19::chr2:62115725..62115799,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10575 | |EntrezGene=10575 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1617 | |HGNC=1617 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z9L0,F5H5W3,P50991 | |UniProt=B7Z9L0,F5H5W3,P50991 | ||
|association_with_transcript=0bp_to_ENST00000538252,ENST00000544079,NM_006430,uc002sbo.2,uc010ypq.1,uc010ypr.1,uc010yps.1_5end | |association_with_transcript=0bp_to_ENST00000538252,ENST00000544079,NM_006430,uc002sbo.2,uc010ypq.1,uc010ypr.1,uc010yps.1_5end | ||
|cluster_id=chr2:62115725..62115799,- | |||
|description=CAGE_peak_1_at_CCT4_5end | |description=CAGE_peak_1_at_CCT4_5end | ||
|id=chr2:62115725..62115799,- | |id=chr2:62115725..62115799,- | ||
|ontology_enrichment_celltype=CL:0000066!2.06e-17!254;CL:0002321!1.42e-14!248;CL:0000220!7.24e-14!246;CL:0000012!2.80e-13!682;CL:0000548!6.18e-13!679;CL:0000004!6.18e-13!679;CL:0000255!6.18e-13!679;CL:0000076!1.65e-08!62;CL:0000055!2.70e-08!180;CL:0000222!4.43e-07!119 | |ontology_enrichment_celltype=CL:0000066!2.06e-17!254;CL:0002321!1.42e-14!248;CL:0000220!7.24e-14!246;CL:0000012!2.80e-13!682;CL:0000548!6.18e-13!679;CL:0000004!6.18e-13!679;CL:0000255!6.18e-13!679;CL:0000076!1.65e-08!62;CL:0000055!2.70e-08!180;CL:0000222!4.43e-07!119 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.84e-17,253;CL:0002321,1.72e-14,250;CL:0000076,1.26e-08,63;CL:0000222,5.52e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.77e-43!239;DOID:162!2.77e-42!235;DOID:0050687!1.70e-24!143;DOID:0050686!6.91e-18!137;DOID:305!7.90e-17!106;DOID:2531!1.99e-11!51;DOID:0060083!1.99e-11!51;DOID:1240!1.90e-09!39;DOID:3095!2.60e-09!22;DOID:2994!2.60e-09!22;DOID:8692!1.01e-07!31 | |ontology_enrichment_disease=DOID:14566!4.77e-43!239;DOID:162!2.77e-42!235;DOID:0050687!1.70e-24!143;DOID:0050686!6.91e-18!137;DOID:305!7.90e-17!106;DOID:2531!1.99e-11!51;DOID:0060083!1.99e-11!51;DOID:1240!1.90e-09!39;DOID:3095!2.60e-09!22;DOID:2994!2.60e-09!22;DOID:8692!1.01e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.71e-09;22!DOID:2994;2.71e-09;22!DOID:1240;8.26e-08;39!DOID:8692;1.35e-07;31!DOID:2531;2.64e-07;51!DOID:0060083;2.64e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.77e-43,239;DOID:162,2.77e-42,235;DOID:0050687,1.70e-24,143;DOID:0050686,6.91e-18,137;DOID:305,7.90e-17,106;DOID:2531,1.99e-11,51;DOID:0060083,1.99e-11,51;DOID:1240,1.90e-09,39;DOID:3095,2.60e-09,22;DOID:2994,2.60e-09,22;DOID:8692,1.01e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.82e-08!238;UBERON:0009142!6.82e-08!238;UBERON:0000490!2.49e-07!138 | |ontology_enrichment_uberon=UBERON:0003104!6.82e-08!238;UBERON:0009142!6.82e-08!238;UBERON:0000490!2.49e-07!138 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.33e-09,148 | |||
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| ||
|short_description=p1@CCT4 | |short_description=p1@CCT4 | ||
}} | }} |
Latest revision as of 21:45, 17 September 2015
Short description: | p1@CCT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538252, ENST00000544079, NM_006430, uc002sbo.2, uc010ypq.1, uc010ypr.1, uc010yps.1_5end |
EntrezGene: | CCT4 |
HGNC: | 1617 |
UniProt: | B7Z9L0F5H5W3P50991 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.84e-17 | 253 |
embryonic cell | 1.72e-14 | 250 |
squamous epithelial cell | 1.26e-08 | 63 |
mesodermal cell | 5.52e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 7.33e-09 | 148 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.77e-43 | 239 |
cancer | 2.77e-42 | 235 |
cell type cancer | 1.70e-24 | 143 |
organ system cancer | 6.91e-18 | 137 |
carcinoma | 7.90e-17 | 106 |
hematologic cancer | 1.99e-11 | 51 |
immune system cancer | 1.99e-11 | 51 |
leukemia | 1.90e-09 | 39 |
germ cell and embryonal cancer | 2.60e-09 | 22 |
germ cell cancer | 2.60e-09 | 22 |
myeloid leukemia | 1.01e-07 | 31 |