FFCP PHASE1:Hg19::chr2:62115725..62115799,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10575 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1617 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z9L0,F5H5W3,P50991 | |||
|association_with_transcript=0bp_to_ENST00000538252,ENST00000544079,NM_006430,uc002sbo.2,uc010ypq.1,uc010ypr.1,uc010yps.1_5end | |||
|cluster_id=chr2:62115725..62115799,- | |||
|description=CAGE_peak_1_at_CCT4_5end | |||
|id=chr2:62115725..62115799,- | |||
|ontology_enrichment_celltype=CL:0000066!2.06e-17!254;CL:0002321!1.42e-14!248;CL:0000220!7.24e-14!246;CL:0000012!2.80e-13!682;CL:0000548!6.18e-13!679;CL:0000004!6.18e-13!679;CL:0000255!6.18e-13!679;CL:0000076!1.65e-08!62;CL:0000055!2.70e-08!180;CL:0000222!4.43e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.84e-17,253;CL:0002321,1.72e-14,250;CL:0000076,1.26e-08,63;CL:0000222,5.52e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.77e-43!239;DOID:162!2.77e-42!235;DOID:0050687!1.70e-24!143;DOID:0050686!6.91e-18!137;DOID:305!7.90e-17!106;DOID:2531!1.99e-11!51;DOID:0060083!1.99e-11!51;DOID:1240!1.90e-09!39;DOID:3095!2.60e-09!22;DOID:2994!2.60e-09!22;DOID:8692!1.01e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.71e-09;22!DOID:2994;2.71e-09;22!DOID:1240;8.26e-08;39!DOID:8692;1.35e-07;31!DOID:2531;2.64e-07;51!DOID:0060083;2.64e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.77e-43,239;DOID:162,2.77e-42,235;DOID:0050687,1.70e-24,143;DOID:0050686,6.91e-18,137;DOID:305,7.90e-17,106;DOID:2531,1.99e-11,51;DOID:0060083,1.99e-11,51;DOID:1240,1.90e-09,39;DOID:3095,2.60e-09,22;DOID:2994,2.60e-09,22;DOID:8692,1.01e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.82e-08!238;UBERON:0009142!6.82e-08!238;UBERON:0000490!2.49e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,7.33e-09,148 | |||
|phase1_expression=121.179478973461,120.538594950624,121.502696330727,101.074031336662,110.39939032354,109.042315512546,197.573904971282,224.260555066525,234.544694123455,143.508618916881,139.560233594486,124.511582114198,108.671995030123,238.74529485993,276.71680873281,152.617808244553,177.192191239049,181.116902416069,181.511001150069,118.07309469564,134.232454838718,89.0211408997769,182.618559789614,275.801966521862,240.037526905263,272.337378085698,299.749252081752,297.36933180308,83.3932266919676,105.553084476733,77.8725100279862,225.258199997337,272.290150575538,228.877732293242,284.614494932028,263.155249334217,236.641954103887,77.5593571944628,73.599812221542,90.9275548299419,108.375089532123,89.0707581552194,109.469616244529,60.6310655710785,90.3123505416254,81.9934126814819,71.3557143300452,114.304672870068,100.035157799118,84.0061785580679,125.518746199259,88.2078717484423,74.8098127198462,116.832727728673,89.3814811522656,57.7903982395796,85.6925311181636,74.383473351323,59.0741912275842,93.7112759062193,88.2285233602677,68.9389217390237,99.5323651531943,95.9005688698562,71.6816819412603,141.846306172785,116.467760562173,82.158313538955,107.946964112982,90.5677482420336,69.6209428028374,102.381182804543,81.6472959597482,81.9670510890334,87.3803672856329,87.4276551769927,79.9779853763045,68.4806631357269,75.3803001609306,104.884689696779,81.754754328826,88.4094504220828,146.076882902898,139.811484483106,138.763443602715,118.204271650922,134.5330516441,121.84751727035,132.208974556972,179.362105852648,114.411806790999,101.004796571801,111.623782612567,256.41237744331,158.063414760793,178.574409477502,130.811997125699,143.448928403445,128.912139872692,106.999357050034,148.946475851551,147.715715389237,130.533908033301,84.6719472327319,115.190909822661,102.348659297633,84.4908054946849,108.749530447098,101.316231749145,104.582507327938,96.9988562428328,100.561670750063,132.123327777396,134.840577357215,113.943720947425,111.156465186312,123.013778446217,125.767645046643,94.3763451232746,150.362875560974,139.98294257913,133.063286222772,98.0244025196301,116.595802761675,112.437653897111,117.204739761788,133.843863498131,109.270854827805,105.103996942918,127.735124224629,158.474463104075,218.648480263385,169.673619566365,168.069205858823,145.387994084408,174.540055347793,151.104329939709,119.225543224146,213.837756425121,211.529845179286,241.896999798869,117.815678410193,123.131807442879,185.763005834999,108.398829480664,105.348491066057,131.096549071601,91.1034184846406,97.2391348326217,97.321865348346,271.310686055552,277.855774219278,241.262648617278,322.225526896685,193.389240092767,226.972384600556,294.055917917293,190.969985026134,209.546328722472,167.02558576957,180.064704747789,269.136325424353,186.463411966802,237.142686823085,201.725345022558,261.648203872354,287.622126334124,309.568959848653,285.168945686543,255.352462423827,301.36686876552,42.1697335795402,23.2668158488995,122.542428652052,129.212707440783,191.33870312518,170.807843249052,190.459516177212,208.545008732634,205.768679252227,176.135842954013,162.307246858491,158.406417018481,188.594940897563,227.048583424594,100.804046811524,172.27660141952,134.031859008932,329.328881055988,319.464220064892,317.428997492025,320.596181297478,317.10909801717,323.317757028576,209.46217970752,232.279694036553,216.364185782053,135.432325730154,139.953081971663,117.410815690005,100.606539854273,264.624371135792,290.525203142701,215.832945962178,159.787854000625,159.067166019691,148.885916376437,241.383685764525,245.225631986674,119.805695127216,155.134151648799,242.773696732281,150.353640158882,207.915915816823,125.070527454828,185.822741797634,146.35038175212,251.676472921382,148.016237016817,112.99059371635,184.604988108639,147.601823903493,183.634121472258,201.957591555645,189.285807690039,220.839538449533,339.086903040275,324.697932387639,313.839839690569,286.933800282545,299.757170840247,361.692562844148,142.369074420133,129.29142857677,244.498810793891,158.813831386937,220.895121390893,224.901226875743,225.229145944344,234.262721046745,221.029121355717,204.806677446862,222.322570107098,250.786233177906,237.231751336543,223.153351028906,152.060023652678,91.1571529722398,95.0735966175534,70.5641814650601,88.7285243752816,94.3514128010521,120.521140963006,141.709654912103,176.119443993739,212.91565258047,177.027210364113,221.431453917511,298.772106007367,284.153938191527,100.67476634089,119.592500307152,321.858892716359,190.241794564101,227.89027551173,177.42636429836,239.826495514684,195.961776801636,172.264558755122,177.706635553639,115.721992861077,124.490269054074,140.159186038271,181.843637934347,116.41161484181,172.2567431495,256.495609020957,255.757865892287,292.137601523891,152.232940509847,85.4069809928293,108.017948196742,98.0015683235338,127.883585060923,147.061123180663,175.332687331249,128.939191931052,174.493894943159,190.950653950072,197.625732061298,138.62581982583,145.658278564624,170.460386913813,281.105649551701,180.72185862937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| |||
|short_description=p1@CCT4 | |||
}} |
Latest revision as of 21:45, 17 September 2015
Short description: | p1@CCT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCT4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538252, ENST00000544079, NM_006430, uc002sbo.2, uc010ypq.1, uc010ypr.1, uc010yps.1_5end |
EntrezGene: | CCT4 |
HGNC: | 1617 |
UniProt: | B7Z9L0F5H5W3P50991 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.84e-17 | 253 |
embryonic cell | 1.72e-14 | 250 |
squamous epithelial cell | 1.26e-08 | 63 |
mesodermal cell | 5.52e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 7.33e-09 | 148 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.77e-43 | 239 |
cancer | 2.77e-42 | 235 |
cell type cancer | 1.70e-24 | 143 |
organ system cancer | 6.91e-18 | 137 |
carcinoma | 7.90e-17 | 106 |
hematologic cancer | 1.99e-11 | 51 |
immune system cancer | 1.99e-11 | 51 |
leukemia | 1.90e-09 | 39 |
germ cell and embryonal cancer | 2.60e-09 | 22 |
germ cell cancer | 2.60e-09 | 22 |
myeloid leukemia | 1.01e-07 | 31 |