FFCP PHASE1:Hg19::chr1:38019843..38019859,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=79753 | |EntrezGene=79753 | ||
Line 8: | Line 8: | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468040_5end | |association_with_transcript=0bp_to_ENST00000468040_5end | ||
|cluster_id=chr1:38019843..38019859,- | |||
|coexpression_cluster_id=C175 | |coexpression_cluster_id=C175 | ||
|description=CAGE_peak_2_at_SNIP1_5end | |description=CAGE_peak_2_at_SNIP1_5end |
Latest revision as of 21:58, 17 September 2015
Short description: | p2@SNIP1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNIP1_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000468040_5end |
EntrezGene: | SNIP1 |
HGNC: | 30587 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SNIP1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hematopoietic stem cell | 2.19e-21 | 168 |
leukocyte | 5.85e-21 | 136 |
hematopoietic cell | 1.35e-18 | 177 |
classical monocyte | 1.84e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.84e-18 | 42 |
hematopoietic oligopotent progenitor cell | 2.90e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-18 | 161 |
nongranular leukocyte | 2.11e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 7.64e-16 | 120 |
myeloid leukocyte | 2.16e-14 | 72 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
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bone marrow | 3.64e-11 | 76 |
bone element | 1.55e-10 | 82 |
immune system | 2.34e-10 | 93 |
hematopoietic system | 3.59e-10 | 98 |
blood island | 3.59e-10 | 98 |
hemolymphoid system | 2.67e-09 | 108 |
skeletal element | 7.35e-09 | 90 |
skeletal system | 3.36e-08 | 100 |
Showing 1 to 8 of 8 entries