Personal tools

FFCP PHASE1:Hg19::chr13:73636440..73636451,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=688
|EntrezGene=688
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=6349
|HGNC=6349
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-254bp_to_ENST00000464404_5end
|association_with_transcript=-254bp_to_ENST00000464404_5end
|cluster_id=chr13:73636440..73636451,+
|coexpression_cluster_id=C1709
|description=CAGE_peak_9_at_KLF5_5end
|description=CAGE_peak_9_at_KLF5_5end
|id=chr13:73636440..73636451,+
|id=chr13:73636440..73636451,+
|ontology_enrichment_celltype=CL:0002076!8.89e-18!43;CL:0000066!2.63e-16!254;CL:0000223!6.85e-14!59;CL:0002251!1.44e-11!21
|ontology_enrichment_celltype=CL:0002076!8.89e-18!43;CL:0000066!2.63e-16!254;CL:0000223!6.85e-14!59;CL:0002251!1.44e-11!21
|ontology_enrichment_disease=DOID:305!1.10e-19!106;DOID:0050687!1.00e-13!143;DOID:1749!8.58e-09!14;DOID:299!3.77e-07!25;DOID:162!7.36e-07!235
|ontology_enrichment_celltype_v019=CL:0002541;1.43e-09;3!CL:0002231;1.43e-09;3!CL:0002076;5.49e-08;42!CL:0002327;2.19e-07;4
|ontology_enrichment_celltype_v019_2=CL:0002541,1.11e-09,3;CL:0002231,2.85e-09,3;CL:0002076,1.13e-08,42;CL:0000223,1.48e-07,58;CL:0002327,3.44e-07,4
|ontology_enrichment_development_v019=UBERON:0004874;3.08e-08;1
|ontology_enrichment_disease_v019=DOID:3493;6.57e-14;2!DOID:3151;3.08e-08;1!DOID:3149;3.08e-08;1!DOID:3112;8.48e-08;1
|ontology_enrichment_disease_v019_2=DOID:3493,3.92e-14,2;DOID:3151,3.10e-08,1;DOID:3149,3.10e-08,1;DOID:3112,1.64e-07,1
|ontology_enrichment_uberon=UBERON:0004119!3.09e-17!169;UBERON:0000925!3.09e-17!169;UBERON:0006595!3.09e-17!169;UBERON:0001007!7.44e-17!155;UBERON:0001555!7.44e-17!155;UBERON:0007026!7.44e-17!155;UBERON:0004921!1.28e-13!129;UBERON:0004185!1.28e-13!129;UBERON:0000161!8.16e-11!35;UBERON:0001004!7.28e-10!72;UBERON:0000077!2.11e-09!130;UBERON:0000344!4.11e-09!12;UBERON:0000065!2.19e-07!53;UBERON:0001046!6.45e-07!19
|ontology_enrichment_uberon_v019=UBERON:0003124;1.43e-09;3!UBERON:0000920;1.43e-09;3!UBERON:0000989;3.08e-08;1!UBERON:0008811;3.08e-08;1!UBERON:0001911;2.19e-07;4
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.11e-09,3;UBERON:0000989,2.89e-08,1;UBERON:0008811,2.89e-08,1;UBERON:0006258,2.89e-08,1;UBERON:0005876,2.89e-08,1;UBERON:0004874,2.89e-08,1;UBERON:0001911,3.44e-07,4;UBERON:0005333,3.44e-07,4;UBERON:0008425,3.44e-07,4;UBERON:0005311,3.44e-07,4
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0.728590576585084,1.48313777113772,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.709840800239063,0.674338760312407,0.241011029883482,0.772057809126758,0.217879444092406,1.18635309555548,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0.219500570817251,0,0.603173834469785,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,1.25381931783988,1.16253575405585,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,1.0877350463246,0.40101294060657,1.28913384510255,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,0,0.193341436584244,0,0,0,0,0.290033387828457,0.0852266274161009,0.178064071293475,2.14870389969272,0.576570202095319,0,0.50578890427775,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0,0,0,0,0.71623345421307,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0,0,0,0.0898683511473268,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,1.53366118706464,0.307801034015188,0,0,0.179515288819544,0.217294743844016,1.27600463892768,0.824378340616761,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0.282706142867882,0,0,0.265372693510018,1.83309043480088,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0.520679215005393,0.391969589657511,0.34823682632161,0,0.171986032471617,0.387025325156341,1.16942907337897,0.574808199372465,0.775912131907355,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,1.95551382734803,0.0801588202515337,0.426905989478705,0,0.72045208577053,0,0,1.58460277786965,0,1.88555227693436,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,1.20008329398946,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0.589848616738702,3.30171477339022,0.346576998451015,0,0,0.198916222116275,0.0752103283492573,0,0.781514011233092,0.261906694481422,1.14640342257068,0.147856086217045,0,0,0,0,0,0,2.97726707033577,0.351742488719241,0.255524855279191,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0.314231179832004,0.840816489941367,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,1.53646629384555,0.691259661814092,0,0,0,0,1.14553434272025,0.62041277132864,0,0.111855431797792,1.3741032706134,1.5849330247695,0.647428837187895,0,0,0,0.233939463462106,0,0,0.22589216407792,0,0.150962843566674,0.694567422971502,0.874238242015829,1.41095188908457,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0.0918948995348449,0.50141507858475,0.303114792872958,0.535928260312357,0,0,1.49263787330687,0.476128862927481,0,0,0.33639558774184,0.0636471582781649,0.808468755832877,1.52401723527873,0.684466602170562,0.336760265072938,0.502055437748735,1.33064142618405,0.488419611665847,0.106727345877715,0,1.3473780315988,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0.290209238628584,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0.728590576585084,1.48313777113772,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.709840800239063,0.674338760312407,0.241011029883482,0.772057809126758,0.217879444092406,1.18635309555548,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,1.10689594688802,0,0.219500570817251,0,0.603173834469785,0.925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,1.25381931783988,1.16253575405585,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0.749007023947182,0,0.828831026872071,0.12269149171914,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,1.0877350463246,0.40101294060657,1.28913384510255,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.309123034943167,0.183138929636687,0,0,0,0,0.193341436584244,0,0,0,0,0.290033387828457,0.0852266274161009,0.178064071293475,2.14870389969272,0.576570202095319,0,0.50578890427775,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0,0,0,0,0.71623345421307,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0.251932747854276,0,0,0,0.0898683511473268,0.537063524026827,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0.21787692703798,1.53366118706464,0.307801034015188,0,0,0.179515288819544,0.217294743844016,1.27600463892768,0.824378340616761,1.5991043280559,0,0,0,0,0,0,0,0,0,0.652931232636591,0.282706142867882,0,0,0.265372693510018,1.83309043480088,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0.520679215005393,0.391969589657511,0.34823682632161,0,0.171986032471617,0.387025325156341,1.16942907337897,0.574808199372465,0.775912131907355,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,1.95551382734803,0.0801588202515337,0.426905989478705,0,0.72045208577053,0,0,1.58460277786965,0,1.88555227693436,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0.244052529803926,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,1.20008329398946,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.657852148736121,0.176689145945881,0,0,0,0,0,0,0,0.132864840313363,0,0,0.245772908753719,0.211312123358627,0,0,0.172214979660816,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0.392590874004102,0.589848616738702,3.30171477339022,0.346576998451015,0,0,0.198916222116275,0.0752103283492573,0,0.781514011233092,0.261906694481422,1.14640342257068,0.147856086217045,0,0,0,0,0,0,2.97726707033577,0.351742488719241,0.255524855279191,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0,0.078493092850514,0.314231179832004,0.840816489941367,0,0.215927591218621,0,0,0,0,0,0,0.414432328326074,1.53646629384555,0.691259661814092,0,0,0,0,1.14553434272025,0.62041277132864,0,0.111855431797792,1.3741032706134,1.5849330247695,0.647428837187895,0,0,0,0.233939463462106,0,0,0.22589216407792,0,0.150962843566674,0.694567422971502,0.874238242015829,1.41095188908457,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0.458729283404541,0,0,0,0,1.5870805215462,0.371995018166751,0.462175628631418,0.432626562123789,0,0,0,0,0,0.0918948995348449,0.50141507858475,0.303114792872958,0.535928260312357,0,0,1.49263787330687,0.476128862927481,0,0,0.33639558774184,0.0636471582781649,0.808468755832877,1.52401723527873,0.684466602170562,0.336760265072938,0.502055437748735,1.33064142618405,0.488419611665847,0.106727345877715,0,1.3473780315988,0,0.122241444182866,0.406896178315738,0.665756774185513,0,0
|short_description=p9@KLF5
|short_description=p9@KLF5
}}
}}

Latest revision as of 22:36, 17 September 2015

Short description:p9@KLF5
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_9_at_KLF5_5end
Coexpression cluster:C1709_salivary_signet_Prostate_cervical_keratoacanthoma_rectal_tubular
Association with transcript: -254bp_to_ENST00000464404_5end
EntrezGene:KLF5
HGNC: 6349
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data