FFCP PHASE1:Hg19::chr21:27372448..27372473,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=351 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=620 | |||
|TSSclassifier=strong | |||
|UniProt=P05067 | |||
|association_with_transcript=25bp_to_X06981,X06982_5end | |||
|cluster_id=chr21:27372448..27372473,- | |||
|description=CAGE_peak_14_at_APP_5end | |||
|id=chr21:27372448..27372473,- | |||
|ontology_enrichment_celltype=CL:0000066!5.65e-11!254;CL:0000213!6.74e-09!57;CL:0000215!6.74e-09!57;CL:0002139!2.46e-08!24;CL:0000220!3.89e-08!246;CL:0002321!5.00e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.71e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.03e-11,58;CL:0000215,3.03e-11,58;CL:0000066,1.78e-09,253;CL:0002139,2.92e-09,24;CL:0002321,1.14e-08,250;CL:0000222,1.09e-07,121;CL:0000115,1.19e-07,36;CL:0002078,1.31e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.19e-13!659;UBERON:0000467!7.05e-12!625;UBERON:0000480!1.25e-11!626;UBERON:0000477!1.06e-08!286;UBERON:0000922!1.26e-08!612;UBERON:0002050!1.79e-08!605;UBERON:0005423!1.79e-08!605;UBERON:0000923!3.31e-08!604;UBERON:0005291!3.31e-08!604;UBERON:0006598!3.31e-08!604;UBERON:0002532!3.31e-08!604;UBERON:0003101!4.15e-08!22;UBERON:0000079!4.15e-08!22;UBERON:0004111!4.62e-08!241;UBERON:0005156!1.22e-07!59;UBERON:0000990!1.22e-07!59;UBERON:0000483!1.80e-07!309;UBERON:0000119!2.74e-07!312;UBERON:0000062!6.67e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.04e-08;22!UBERON:0000079;2.04e-08;22!UBERON:0006914;5.57e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,4.66e-08,22;UBERON:0000079,4.66e-08,22;UBERON:0004111,1.49e-07,240;UBERON:0000055,3.09e-07,68;UBERON:0006914,3.64e-07,25;UBERON:0005156,4.46e-07,59;UBERON:0000990,4.46e-07,59 | |||
|phase1_expression=0,1.07050261945492,0.986680828671798,1.0007329835313,1.34088328328186,1.74467704820074,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0.655324116390517,0.527533956456907,0.618831764800233,1.32558950291166,2.01697543935533,2.41077811209591,1.46062018077475,0,0,0,0.940364164434263,0,1.09499540058307,0.376627918784408,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0.739508020333575,0,0,0,0,0.401088894940283,0,0.223915474239924,0,0.257575567634187,0.726991193897824,0.377875943688809,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0,0.612167784741805,0,0,0,0.398927315243264,0,0.290209238628584,0.56738522469114,0,0,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0.212604299965044,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0.724232594804119,0.795285947051099,0.973269740605272,0.850813354476611,0.886917589850256,0.43917392846563,0.72038491523742,0.364295288292542,0.741568885568859,0.324547393654683,0.522389211897802,0.930705723632056,0.715471872916026,1.71598473234038,0.371457501329565,0.596287222100115,0.860234595106124,1.04142150482278,2.26123176769604,1.25849830862972,3.30141650328081,1.8809546988313,3.87625138753993,6.04802646567407,1.00416183829401,1.20848795132744,1.52054421143703,2.92874469057803,1.47065232138347,3.24056779152704,1.87529429396568,2.02076435363553,0.675668882899933,0,0.949265659568129,2.38162267109529,0,0,2.18047026071267,0,0.759783069987479,0.529636723252875,5.16305917347865,3.19201543978521,1.12135520028461,0,0.49333509683432,0.311211035399766,1.48181739276657,1.30769522490767,0.908144565869588,2.30470369792,0.234321431833797,1.24864030732128,0.570471821544449,1.19558944441441,0.352303495931295,0,0.421352420106746,0.408308342509787,1.84251475967652,0.723280468230358,1.18800285728205,1.7308685049499,0,0,0.673344455816265,0.250237039743928,0.554128230968366,0.438977620880838,0,1.20190447125277,0.567160915800105,0.538168907066586,0.427114777637135,0.635795703478686,0.600182192168805,0.92747276314595,0.515281080091258,0.558350568994769,0.506328996723799,0.487185025805993,0,1.19664868234989,1.13152239773168,0.710019185033229,0.201504196455281,0.508681776931463,3.09217365061275,2.45471508531751,0,0.487894824518382,0.265059536642971,0.580969714347592,0.829288440122964,0.252320850875628,1.09493207722749,0,2.57296375277154,0,2.3218396401599,0.721879481669586,0.473227200159376,1.51726221070292,0.482022059766964,1.21323370005633,0.653638332277218,0.71181185733329,0.943819157121151,0.98110732562673,0,0,1.40241773803446,0,2.94017422771084,0,0.982827216677626,1.77236972004421,0,0.368965315629341,1.02940686179115,3.84125998930189,0,0.804231779293047,1.38882667737794,0,0,1.44331342025273,0.463721619900307,0,1.87676382089396,0.925971025153221,2.28304982681518,0.790204397959275,0,0,0,0.594524649154913,0,2.85569617938061,1.41775097242386,0.716468181622786,2.03443756959773,1.15014803749563,0,0,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0.822619941626588,0.600686115687835,0.285826432630578,0,0.87192013766656,0.2933531432838,1.55126058909333,0,0.845302752556,3.72313363218819,0,0.514414748524284,0,0.266422179016099,1.14382394926518,0.542621605391443,0,0.65147236858747,0,0.791951872933429,0.904318131178758,0,0.899756920638513,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,2.31650090668127,0.821905290201534,0.537182889719687,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0.414415513436035,0.613457458595699,0.500170521059677,0.271265023699736,0.623912584592421,1.42743191037729,0.315404830067869,0.702848489956279,0.601892199455438,0,2.0694614258501,0.664225598535437,0.368738337083406,1.30325421702124,0.587403472388222,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,0,1.66435439510497,0.30239029332968,2.23297027036899,0.153461973288062,1.96462066103151,1.02511319404561,0.511707249066704,1.93024705372329,2.96836132889982,0.925258162815933,0.887808626565635,0.410635780069046,1.55776328755086,0.464841513839837,1.57117284469109,9.02279116364782,1.84161977871793,1.03333003348146,0.728364672026868,2.09799063935079,0.451199612907412,0.847168708148562,0,2.92278449306521,1.26661954671451,0,2.04112446331819,1.51141141271498,3.08454505380579,0.270946437543853,0.501689773854853,1.01950509218015,0,0,0,0,0.512900250232778,1.64007322849853,1.95227036798582,0.9273691048295,0.640986253728404,0.247528499761764,1.14853107599234,1.95018073810956,3.21367859688319,1.16004861950546,0.770243085573222,0.767518373630648,0.551346289938122,0.859361958946189,0.290033387828457,0.426133137080504,0.712256285173899,3.96683796866347,2.88285101047659,0.638063562472921,2.52894452138875,0.464845549297286,3.77774816196768,0,0.308033580176089,0,0,1.8532421910392,0.286249773483982,0,0.316379424718726,0.571890581771475,0.255897791311334,1.71175595213568,0,0,0.719489830333259,1.09814811894422,0.706874414074119,1.41527737101321,1.58510321173008,0,0.48763373908959,1.94970791705028,0,0.818999468447914,1.69686518344455,3.39024349860728,0,0.66343897524122,1.31535265576129,1.15755106853338,0.655894752046633,0.405820753925408,0,1.12678241012897,0,0.392996164052485,1.78335525740625,0.354761064070598,1.47775344708365,1.64647446479951,0,0,0.962221127255121,0,0,1.03558180854457,0.43050537267123,0,1.7737206141467,1.83778720165568,0,0,0,0,0,0,0,0.79312517629427,0.640944426764839,0.962479855263359,0,0.371606350251437,0.432807638929335,0,0,0,0,0,0.324621940274555,0.842391534340376,0.456469358066384,0.47003968731907,0,0.50787533340481,0,0.403599414382095,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0.879049075631364,0.242721043499027,0,0.852408440419239,0.95497793895076,0,0.307160702099232,0,0.844016498463076,0.556543525114529,0,0,0.796991953004279,0.276283915531148,0.251932747854276,0.20453736500431,0.123084805461069,1.86623752597084,0.269605053441981,0.716084698702437,0,0.789147245095469,0,0,3.87733098438087,1.02044907978036,1.99613798001194,1.30213880542617,0.0874599999961957,0,0.455173793141999,1.27126825146383,0.709163045303809,0,0.291604613383254,1.21537496453305,0.885741385813839,1.20596438625408,0,0.221158519862449,0,0.658156191461918,0.32681539055697,0.41827123283581,0.538651809526579,1.02547850262301,0.922255617552241,2.06442582142476,0.217294743844016,0.957003479195758,2.1983422416447,3.19820865611181,0,0.627921025580099,0,0,0,0,0,0.158936578980379,2.3209787098083,0.489698424477443,0.141353071433941,0,0,0.442287822516696,1.83309043480088,0,0,0.104421949505455,0.741412462787447,0,1.40558667435203,0,0.391329237864179,1.21390189767046,0.789168805698781,1.20990716048664,0.61214552326098,0.252746318513952,0.901940516486955,0.207376382794494,0,0.992975867626496,0.627865836814451,0,0,2.35746944122336,2.60339607502696,0.293977192243133,0.34823682632161,1.04836000945218,1.37588825977293,0.387025325156341,0.438535902517113,0.246346371159628,0.484945082442097,0.617792886840502,1.12990370390266,0.822251547880505,0.19871461170299,0.696418755514666,0.391102765469606,0.480952921509202,1.06726497369676,2.59752492456769,0.864542502924636,0.343609788497747,0,0.576219191952599,0.124252535565433,0,0.67952103036807,0.209205692624666,0.305994652908965,0.866851769704557,0.600420288709789,1.23214841002794,0,0.429765441419957,0,1.39641200636127,0.458320848023367,0.717873024576814,1.39775300349294,1.71690419254628,0.89268582976749,0.671834724867263,1.44119953416961,0,0,0.329663433524666,0.0674035438541849,0.78741985211799,0,0,1.0896272488926,2.25054407851027,1.65047323916681,2.07720169014593,0,0,0.303747783290123,1.34173875039706,1.02447419488958,0.577000469484979,0.105600336519406,2.86859742932552,0.383830394638891,1.42939065274673,2.64836788146173,0,4.3439968140297,6.04955043840887,2.28611152076586,1.19730191562487,0.164185041498678,0.681552087141687,0.679872549120754,0.58620893471233,0,0.387848869084652,1.3223260174269,0.171086837884329,0,0.854299300541557,0.628817220398664,1.65695622138878,0,0,0,0,0,0,0,0,0.785270481251171,1.77213635993397,5.61320818549031,0.625954653532499,0.573409195690071,0.998361463831671,0.310482014706917,0,0.37494122388632,0.606596470166591,3.99651466962954,2.11739237728355,0,0.579684114443301,0.597019211547496,0.467426619694449,1.66441758450784,0.568209015825267,1.76097531226803,0.889811221596536,2.74608082076308,2.11723293268535,0.310874401165561,0.887130899937803,0.955780602982214,0.449803112163605,1.24210365501008,0,0,1.5652351854352,1.6528336989694,3.04644169735036,3.25496586563729,0.545545977607678,0.751873899297419,3.24823631914946,1.19428766609585,0.400027764663154,0.343395705182793,1.01024846629776,0,0,2.35885750512418,1.04397716786085,0.226705925512272,0.926089897295336,1.71315693154527,2.68633261622231,2.16161013012681,0.438568099157414,0.706756583783524,1.3503982678964,2.70307905044916,1.53744911152768,3.45430341731199,2.12701969324168,0.553033744606923,0,0,0,3.93131818615695,0.245772908753719,0.211312123358627,0.19998739585493,0.426766918776564,0,1.70254786070051,0.552317850755522,0.839277046316667,0,0.127894371303652,0.431299245586727,1.57265941855896,0.54604819096007,0.33946505990805,0.425149840203366,0.867550349813015,0.558644917973244,0,0.315446980005013,0,2.1160556621441,3.3687002508852,0.578063025868136,1.41696576325585,0.638535436228605,0.205116364240755,0.252071696221718,0.276629009856872,0.807378228159255,1.42769420259154,0.490738592505128,0,2.56800037930351,1.03973099535304,1.1441462864015,0,1.39241355481392,0.526472298444801,1.41193548092464,3.12605604493237,0.785720083444267,2.29280684514135,0.147856086217045,0.675375846183947,0.781078098613847,0.206686796501184,0.507326481551255,0.546974809018219,0,1.48863353516788,0.879356221798103,0.383287282918786,0,0.336283722218824,0,0.455324382702595,0.532214220975833,0.115233987555779,0.342976018874837,0.611727596791485,0.263091094251396,1.53651993149159,1.11231401892069,0.941917114206168,1.57115589916002,0,1.82631744101899,0.215927591218621,1.43325506366115,0.714765441766563,0,0.929931402945002,0,0.801711364730253,2.69381013411948,3.7558064960669,0,0.430227358820278,0.709992004383392,0.937347452350735,4.23387050190929,1.60374807980835,1.24082554265728,0,1.11855431797792,0.490751168076215,0.243835849964539,0,0,2.3196288626764,0.485710993059139,0,0.596852325484105,0.356760272332706,0.5647304101948,0.109940516745429,0.301925687133347,0.308696632431779,0.437119121007915,2.35158648180761,1.47088993052343,0.471353094203252,0.785233868459781,1.18818560130834,0.4226557275834,1.0195626881269,0.657887425858975,0.193373663920732,0.199882311849858,0.357107877211315,0.352894871715692,0.160482733378337,0,0.458729283404541,1.29005624836306,0.631086248772738,0.611923411718232,0.436350690340377,2.1161073620616,1.11598505450025,0.924351257262837,0.432626562123789,0.883164973845552,0.874124575709564,0.253397002022874,0.917899467677836,2.13773924212448,1.37842349302267,2.005660314339,1.06090177505535,1.33982065078089,0,0.930896962757057,0,0.23806443146374,0.322944549180031,0.248298857183432,0.897054900644907,1.01835453245064,1.21270313374932,1.52401723527873,1.71116650542641,0.202056159043763,0.502055437748735,0.99798106963804,0,2.66818364694289,1.9307228228694,0.359300808426348,0,0.488965776731466,2.03448089157869,0.665756774185513,0.201273793591026,0 | |||
|short_description=p14@APP | |||
}} |
Latest revision as of 22:56, 17 September 2015
Short description: | p14@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_X06981, X06982_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | P05067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.03e-11 | 58 |
barrier cell | 3.03e-11 | 58 |
epithelial cell | 1.78e-09 | 253 |
endothelial cell of vascular tree | 2.92e-09 | 24 |
embryonic cell | 1.14e-08 | 250 |
mesodermal cell | 1.09e-07 | 121 |
endothelial cell | 1.19e-07 | 36 |
meso-epithelial cell | 1.31e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
male organism | 4.66e-08 | 22 |
male reproductive system | 4.66e-08 | 22 |
anatomical conduit | 1.49e-07 | 240 |
vessel | 3.09e-07 | 68 |
squamous epithelium | 3.64e-07 | 25 |
reproductive structure | 4.46e-07 | 59 |
reproductive system | 4.46e-07 | 59 |