FFCP PHASE1:Hg19::chr21:27372448..27372473,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:27372448..27372473,- to FFCP PHASE1:Hg19::chr21:27372448..27372473,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=351 | |EntrezGene=351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=620 | |HGNC=620 | ||
|TSSclassifier=strong | |||
|UniProt=P05067 | |UniProt=P05067 | ||
|association_with_transcript=25bp_to_X06981,X06982_5end | |||
|cluster_id=chr21:27372448..27372473,- | |||
|description=CAGE_peak_14_at_APP_5end | |||
|id=chr21:27372448..27372473,- | |||
|ontology_enrichment_celltype=CL:0000066!5.65e-11!254;CL:0000213!6.74e-09!57;CL:0000215!6.74e-09!57;CL:0002139!2.46e-08!24;CL:0000220!3.89e-08!246;CL:0002321!5.00e-08!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.71e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.03e-11,58;CL:0000215,3.03e-11,58;CL:0000066,1.78e-09,253;CL:0002139,2.92e-09,24;CL:0002321,1.14e-08,250;CL:0000222,1.09e-07,121;CL:0000115,1.19e-07,36;CL:0002078,1.31e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.19e-13!659;UBERON:0000467!7.05e-12!625;UBERON:0000480!1.25e-11!626;UBERON:0000477!1.06e-08!286;UBERON:0000922!1.26e-08!612;UBERON:0002050!1.79e-08!605;UBERON:0005423!1.79e-08!605;UBERON:0000923!3.31e-08!604;UBERON:0005291!3.31e-08!604;UBERON:0006598!3.31e-08!604;UBERON:0002532!3.31e-08!604;UBERON:0003101!4.15e-08!22;UBERON:0000079!4.15e-08!22;UBERON:0004111!4.62e-08!241;UBERON:0005156!1.22e-07!59;UBERON:0000990!1.22e-07!59;UBERON:0000483!1.80e-07!309;UBERON:0000119!2.74e-07!312;UBERON:0000062!6.67e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003101;2.04e-08;22!UBERON:0000079;2.04e-08;22!UBERON:0006914;5.57e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,4.66e-08,22;UBERON:0000079,4.66e-08,22;UBERON:0004111,1.49e-07,240;UBERON:0000055,3.09e-07,68;UBERON:0006914,3.64e-07,25;UBERON:0005156,4.46e-07,59;UBERON:0000990,4.46e-07,59 | |||
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| ||
|short_description=p14@APP | |||
}} | }} |
Latest revision as of 22:56, 17 September 2015
Short description: | p14@APP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_APP_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_X06981, X06982_5end |
EntrezGene: | APP |
HGNC: | 620 |
UniProt: | P05067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.03e-11 | 58 |
barrier cell | 3.03e-11 | 58 |
epithelial cell | 1.78e-09 | 253 |
endothelial cell of vascular tree | 2.92e-09 | 24 |
embryonic cell | 1.14e-08 | 250 |
mesodermal cell | 1.09e-07 | 121 |
endothelial cell | 1.19e-07 | 36 |
meso-epithelial cell | 1.31e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
male organism | 4.66e-08 | 22 |
male reproductive system | 4.66e-08 | 22 |
anatomical conduit | 1.49e-07 | 240 |
vessel | 3.09e-07 | 68 |
squamous epithelium | 3.64e-07 | 25 |
reproductive structure | 4.46e-07 | 59 |
reproductive system | 4.46e-07 | 59 |