FFCP PHASE1:Hg19::chr17:76851179..76851237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-309bp_to_AL110197_5end | |association_with_transcript=-309bp_to_AL110197_5end | ||
|cluster_id=chr17:76851179..76851237,- | |||
|coexpression_cluster_id=C1793 | |coexpression_cluster_id=C1793 | ||
|description=CAGE_peak_2_at_TIMP2_5end | |description=CAGE_peak_2_at_TIMP2_5end | ||
|id=chr17:76851179..76851237,- | |id=chr17:76851179..76851237,- | ||
|ontology_enrichment_celltype=CL:0002334;7.90e-07;12!CL:0000134;9.09e-07;55 | |ontology_enrichment_celltype=CL:0000055!1.37e-20!180;CL:0000057!8.06e-14!75;CL:0000222!7.35e-11!119;CL:0000183!4.31e-08!59;CL:0000192!4.96e-07!42;CL:0000514!4.96e-07!42 | ||
| | |ontology_enrichment_celltype_v019=CL:0002334;7.90e-07;12!CL:0000134;9.09e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-13,76;CL:0000222,3.25e-08,121;CL:0000192,3.97e-07,43;CL:0000514,3.97e-07,43;CL:0002334,5.66e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004457;6.55e-07;9!UBERON:0000042;6.55e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.62e-14!659;UBERON:0000467!1.71e-12!625;UBERON:0000480!3.19e-12!626;UBERON:0004872!2.50e-09!84;UBERON:0005256!7.68e-09!143;UBERON:0000475!1.87e-08!365;UBERON:0002049!2.48e-08!79;UBERON:0007798!2.48e-08!79;UBERON:0003914!4.08e-08!118;UBERON:0000923!6.02e-08!604;UBERON:0005291!6.02e-08!604;UBERON:0006598!6.02e-08!604;UBERON:0002532!6.02e-08!604;UBERON:0002050!6.11e-08!605;UBERON:0005423!6.11e-08!605;UBERON:0000477!6.66e-08!286;UBERON:0000055!7.82e-08!69;UBERON:0000926!1.21e-07!448;UBERON:0004120!1.21e-07!448;UBERON:0006603!1.21e-07!448;UBERON:0001981!1.76e-07!60;UBERON:0007500!1.76e-07!60;UBERON:0004537!1.76e-07!60;UBERON:0006965!1.76e-07!60;UBERON:0000922!1.88e-07!612;UBERON:0004111!3.04e-07!241;UBERON:0000062!3.27e-07!511;UBERON:0004290!4.15e-07!70;UBERON:0000914!4.21e-07!83;UBERON:0002329!4.21e-07!83;UBERON:0003077!4.21e-07!83;UBERON:0003059!4.21e-07!83;UBERON:0007282!4.21e-07!83;UBERON:0009618!4.21e-07!83;UBERON:0007285!4.21e-07!83;UBERON:0002100!4.93e-07!216;UBERON:0000119!7.30e-07!312;UBERON:0000483!8.17e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.55e-07;9!UBERON:0000042;6.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.45e-09,315;UBERON:0004120,1.45e-09,315;UBERON:0006603,1.45e-09,315;UBERON:0005256,1.35e-07,122;UBERON:0004872,3.16e-07,83;UBERON:0004923,5.27e-07,66;UBERON:0002199,7.23e-07,46;UBERON:0002416,7.23e-07,46;UBERON:0007503,8.21e-07,78 | |||
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| ||
|short_description=p2@TIMP2 | |short_description=p2@TIMP2 | ||
}} | }} |
Latest revision as of 23:14, 17 September 2015
Short description: | p2@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TIMP2_5end |
Coexpression cluster: | C1793_Osteoblast_Melanocyte_Preadipocyte_Adipocyte_Mesenchymal_Fibroblast_chorionic |
Association with transcript: | -309bp_to_AL110197_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-13 | 76 |
mesodermal cell | 3.25e-08 | 121 |
smooth muscle cell | 3.97e-07 | 43 |
smooth muscle myoblast | 3.97e-07 | 43 |
preadipocyte | 5.66e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.45e-09 | 315 |
mesoderm-derived structure | 1.45e-09 | 315 |
presumptive mesoderm | 1.45e-09 | 315 |
trunk mesenchyme | 1.35e-07 | 122 |
splanchnic layer of lateral plate mesoderm | 3.16e-07 | 83 |
organ component layer | 5.27e-07 | 66 |
integument | 7.23e-07 | 46 |
integumental system | 7.23e-07 | 46 |
epithelial vesicle | 8.21e-07 | 78 |