FFCP PHASE1:Hg19::chr16:810842..810849,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:810842..810849,+
|short_description=p13@MSLN
|description=CAGE_peak_13_at_MSLN_5end
|association_with_transcript=75bp_to_uc010brd.1_5end
|EntrezGene=1023...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10232 | |EntrezGene=10232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |HGNC=7371 | ||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |UniProt=Q13421 | ||
|association_with_transcript=75bp_to_uc010brd.1_5end | |||
|cluster_id=chr16:810842..810849,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_13_at_MSLN_5end | |||
|id=chr16:810842..810849,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.40e-23!254;CL:0002178!1.15e-08!3;CL:0000077!2.06e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.48e-15;19!CL:0002537;1.16e-10;5!CL:0002097;4.17e-07;2!CL:0002536;4.17e-07;2!CL:0000575;4.17e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.56e-15,19;CL:0002537,1.16e-10,5;CL:0000575,4.98e-07,2;CL:0002097,5.28e-07,2;CL:0002536,5.60e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.53e-21!106;DOID:0050687!5.17e-14!143;DOID:162!9.82e-09!235;DOID:14566!2.38e-08!239;DOID:170!3.47e-07!6;DOID:299!4.97e-07!25;DOID:3493!5.97e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.96e-24;2!DOID:170;1.12e-08;6!DOID:4074;4.17e-07;2!DOID:4905;4.17e-07;2!DOID:4929;4.17e-07;2!DOID:3498;4.17e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.64e-24,2;DOID:170,1.36e-08,6;DOID:4929,3.70e-07,2;DOID:4074,4.42e-07,2;DOID:4905,4.42e-07,2;DOID:3498,4.42e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.99e-22!9;UBERON:0005631!7.45e-15!14;UBERON:0000158!7.45e-15!14;UBERON:0004119!3.03e-12!169;UBERON:0000925!3.03e-12!169;UBERON:0006595!3.03e-12!169;UBERON:0008947!8.12e-12!38;UBERON:0003258!8.12e-12!38;UBERON:0000077!3.00e-10!130;UBERON:0000305!4.22e-10!7;UBERON:0002294!1.11e-09!7;UBERON:0001173!1.11e-09!7;UBERON:0004912!1.11e-09!7;UBERON:0001557!1.59e-09!19;UBERON:0001041!4.32e-09!98;UBERON:0004871!8.87e-09!8;UBERON:0000065!1.39e-08!53;UBERON:0001007!4.53e-08!155;UBERON:0001555!4.53e-08!155;UBERON:0007026!4.53e-08!155;UBERON:0000478!7.16e-08!24;UBERON:0000072!8.54e-08!46;UBERON:0000064!1.23e-07!219;UBERON:0001004!2.94e-07!72;UBERON:0004921!8.12e-07!129;UBERON:0004185!8.12e-07!129;UBERON:0001987!9.27e-07!4;UBERON:0004340!9.27e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.39e-19;10!UBERON:0000158;2.39e-19;10!UBERON:0000305;5.83e-16;7!UBERON:0004913;6.05e-13;1!UBERON:0003703;6.05e-13;1!UBERON:0001174;6.05e-13;1!UBERON:0004914;6.05e-13;1!UBERON:0002394;1.47e-12;4!UBERON:0003928;1.47e-12;4!UBERON:0000478;2.64e-12;24!UBERON:0002294;1.47e-07;7!UBERON:0001173;1.47e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.43e-21,14;UBERON:0000158,4.43e-21,14;UBERON:0000305,7.51e-16,7;UBERON:0004871,6.03e-14,8;UBERON:0004913,4.77e-13,1;UBERON:0003703,4.77e-13,1;UBERON:0001174,4.77e-13,1;UBERON:0004914,4.77e-13,1;UBERON:0000478,2.74e-12,24;UBERON:0002394,8.57e-09,6;UBERON:0003928,8.57e-09,6;UBERON:0003124,1.06e-07,7 | |||
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| ||
|short_description=p13@MSLN | |||
}} | }} |
Latest revision as of 00:30, 18 September 2015
Short description: | p13@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 75bp_to_uc010brd.1_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.56e-15 | 19 |
amnion mesenchymal stem cell | 1.16e-10 | 5 |
corneal epithelial cell | 4.98e-07 | 2 |
cortical cell of adrenal gland | 5.28e-07 | 2 |
amniotic epithelial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.43e-21 | 14 |
membranous layer | 4.43e-21 | 14 |
amnion | 7.51e-16 | 7 |
somatic layer of lateral plate mesoderm | 6.03e-14 | 8 |
hepatopancreatic ampulla | 4.77e-13 | 1 |
extrahepatic bile duct | 4.77e-13 | 1 |
common bile duct | 4.77e-13 | 1 |
duodenal papilla | 4.77e-13 | 1 |
extraembryonic structure | 2.74e-12 | 24 |
bile duct | 8.57e-09 | 6 |
digestive system duct | 8.57e-09 | 6 |
chorion | 1.06e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.64e-24 | 2 |
endocrine gland cancer | 1.36e-08 | 6 |
tubular adenocarcinoma | 3.70e-07 | 2 |
pancreas adenocarcinoma | 4.42e-07 | 2 |
pancreatic carcinoma | 4.42e-07 | 2 |
pancreatic ductal adenocarcinoma | 4.42e-07 | 2 |