FFCP PHASE1:Hg19::chr10:33281363..33281383,-: Difference between revisions
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|id=chr10:33281363..33281383,-
|short_description=p14@ITGB1
|description=CAGE_peak_14_at_ITGB1_5end
|association_with_transcript=7bp_to_ENST00000534049_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3688 | |EntrezGene=3688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6153 | |HGNC=6153 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLR6 | |UniProt=E9PLR6 | ||
|association_with_transcript=7bp_to_ENST00000534049_5end | |||
|cluster_id=chr10:33281363..33281383,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_14_at_ITGB1_5end | |||
|id=chr10:33281363..33281383,- | |||
|ontology_enrichment_celltype=CL:0002541!5.66e-14!3;CL:0000359!4.26e-13!32;CL:0002594!8.76e-10!4;CL:0000192!1.93e-09!42;CL:0000514!1.93e-09!42;CL:0002589!3.80e-09!2;CL:0000680!1.23e-07!57;CL:0000056!1.23e-07!57;CL:0000355!1.23e-07!57;CL:0000187!7.29e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.40e-55;3!CL:0002568;3.91e-19;1!CL:0000349;1.06e-15;19!CL:0000134;3.78e-12;55!CL:0000723;1.81e-08;61!CL:0000034;7.98e-08;69!CL:0000048;1.20e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.40e-55,3;CL:0002568,3.91e-19,1;CL:0000349,1.06e-15,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.88e-19;1!UBERON:0005795;3.37e-08;10 | |||
|ontology_enrichment_disease=DOID:2394!1.21e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.44e-12;14!DOID:0060084;2.47e-07;3!DOID:127;2.47e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-12,14;DOID:0060084,2.47e-07,3;DOID:127,2.47e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.66e-14!3;UBERON:0000920!5.66e-14!3;UBERON:0001637!2.41e-13!42;UBERON:0003509!2.41e-13!42;UBERON:0004572!2.41e-13!42;UBERON:0003124!2.75e-10!7;UBERON:0004573!2.81e-10!33;UBERON:0004571!2.81e-10!33;UBERON:0001310!8.76e-10!4;UBERON:0001529!3.80e-09!2;UBERON:0007204!3.80e-09!2;UBERON:0004872!1.64e-08!84;UBERON:0001981!1.68e-08!60;UBERON:0007500!1.68e-08!60;UBERON:0004537!1.68e-08!60;UBERON:0006965!1.68e-08!60;UBERON:0002118!7.24e-08!5;UBERON:0004532!7.24e-08!5;UBERON:0005631!1.44e-07!14;UBERON:0000158!1.44e-07!14;UBERON:0000055!4.82e-07!69;UBERON:0001134!5.57e-07!61;UBERON:0002036!5.57e-07!61;UBERON:0003082!5.57e-07!61;UBERON:0002049!8.13e-07!79;UBERON:0007798!8.13e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.40e-55;3!UBERON:0000920;2.40e-55;3!UBERON:0000478;4.84e-19;24!UBERON:0005631;3.59e-17;10!UBERON:0000158;3.59e-17;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.40e-55,3;UBERON:0003124,5.82e-42,7;UBERON:0005631,3.04e-21,14;UBERON:0000158,3.04e-21,14;UBERON:0000478,4.84e-19,24 | |||
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|short_description=p14@ITGB1 | |||
}} | }} |
Latest revision as of 00:46, 18 September 2015
Short description: | p14@ITGB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ITGB1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 7bp_to_ENST00000534049_5end |
EntrezGene: | ITGB1 |
HGNC: | 6153 |
UniProt: | E9PLR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.40e-55 | 3 |
mesenchymal stem cell of Wharton's jelly | 3.91e-19 | 1 |
extraembryonic cell | 1.06e-15 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.40e-55 | 3 |
chorion | 5.82e-42 | 7 |
extraembryonic membrane | 3.04e-21 | 14 |
membranous layer | 3.04e-21 | 14 |
extraembryonic structure | 4.84e-19 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-12 | 14 |
cell type benign neoplasm | 2.47e-07 | 3 |
leiomyoma | 2.47e-07 | 3 |