FFCP PHASE1:Hg19::chr7:27183191..27183214,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3202 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5106 | |||
|TSSclassifier=strong | |||
|UniProt=P20719,Q6FG31 | |||
|association_with_transcript=11bp_to_AB587591,BT009744,CR542256,CR542277,DQ890593,DQ893761_5end | |||
|cluster_id=chr7:27183191..27183214,- | |||
|coexpression_cluster_id=C1992 | |||
|description=CAGE_peak_4_at_HOXA5_5end | |||
|id=chr7:27183191..27183214,- | |||
|ontology_enrichment_celltype=CL:0002334!4.83e-10!12;CL:0000136!8.00e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002615;3.02e-10;3!CL:0002564;5.12e-10;3!CL:0002582;2.12e-09;3!CL:0002593;6.02e-08;2!CL:0002602;1.27e-07;2!CL:0002600;2.12e-07;2!CL:0002595;8.90e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,3.56e-10,3;CL:0002615,5.49e-10,3;CL:0002582,7.50e-09,3;CL:0002593,6.06e-08,2;CL:0002600,1.28e-07,2;CL:0002602,1.28e-07,2;CL:0002595,8.95e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.18e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0009569!4.58e-10!113;UBERON:0000464!1.80e-08!104;UBERON:0003688!3.93e-08!6;UBERON:0002358!3.93e-08!6;UBERON:0003684!3.93e-08!6;UBERON:0001178!3.93e-08!6;UBERON:0000915!4.62e-07!52;UBERON:0002100!7.63e-07!216;UBERON:0003886!9.93e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;6.11e-16;5!UBERON:0002216;6.11e-16;5!UBERON:0011134;6.11e-16;5!UBERON:0002209;6.11e-16;5!UBERON:0002213;6.11e-16;5!UBERON:0007844;6.11e-16;5!UBERON:0011138;6.11e-16;5!UBERON:0001130;6.11e-16;5!UBERON:0001066;6.11e-16;5!UBERON:0001468;6.11e-16;5!UBERON:0003688;5.23e-13;6!UBERON:0002358;5.23e-13;6!UBERON:0003684;5.23e-13;6!UBERON:0001178;5.23e-13;6!UBERON:0002242;5.12e-10;3!UBERON:0004905;8.04e-10;8!UBERON:0000982;8.04e-10;8!UBERON:0004770;8.04e-10;8!UBERON:0004457;1.51e-08;9!UBERON:0000042;1.51e-08;9!UBERON:0002456;6.02e-08;2!UBERON:0006444;1.27e-07;2!UBERON:0001995;1.27e-07;2!UBERON:0004715;1.27e-07;2!UBERON:0003834;8.90e-07;5!UBERON:0001533;8.90e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,4.28e-16,5;UBERON:0002216,4.28e-16,5;UBERON:0011134,4.28e-16,5;UBERON:0002209,4.28e-16,5;UBERON:0002213,4.28e-16,5;UBERON:0005856,4.28e-16,5;UBERON:0005866,4.28e-16,5;UBERON:0005863,4.28e-16,5;UBERON:0007844,4.28e-16,5;UBERON:0011138,4.28e-16,5;UBERON:0001130,4.28e-16,5;UBERON:0001066,4.28e-16,5;UBERON:0001468,4.28e-16,5;UBERON:0003688,1.01e-12,6;UBERON:0002358,1.01e-12,6;UBERON:0003684,1.01e-12,6;UBERON:0001178,1.01e-12,6;UBERON:0002242,3.56e-10,3;UBERON:0003068,3.56e-10,3;UBERON:0002328,3.56e-10,3;UBERON:0004880,3.56e-10,3;UBERON:0004905,6.47e-10,8;UBERON:0000982,6.47e-10,8;UBERON:0004770,6.47e-10,8;UBERON:0002456,6.06e-08,2;UBERON:0006444,1.28e-07,2;UBERON:0001995,1.28e-07,2;UBERON:0004715,1.28e-07,2;UBERON:0009569,5.67e-07,112;UBERON:0003834,8.95e-07,5;UBERON:0001533,8.95e-07,5 | |||
|phase1_expression=1.09007027562334,0.856402095563933,5.92008497203079,1.0007329835313,3.12872766099101,0.872338524100369,0,0,0,5.16041266653169,0,0,0,3.83675694176145,4.30816588446291,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,1.57345710739562,0,0.464448369948228,0,0,0,0,0,0,0,1.00272223735071,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37898272294647,0.645484683583826,0,0.188242339542605,0.272906150057846,0,0.918251677112708,0.641858054152187,0,0,0,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0.561643155732475,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.581267877027924,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,6.02878754119172,6.10073421020206,15.1958946596727,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0.828831026872071,1.59498939234882,2.50085260529839,2.44138521329762,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0.744323423456331,0.153461973288062,0.841980283299221,2.30650468660262,0.511707249066704,1.28683136914886,0,0.154209693802656,0.532685175939381,1.14978018419333,1.03850885836724,1.04589340613963,0,0,0,0.114814448164607,0,0,0,0.539107359730903,0,1.46139224653261,1.05551628892876,0,0,0,0,1.35473218771926,0.501689773854853,0.254876273045038,0,0.671624264166535,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0.616194468458578,1.38153307253517,0.413509717453592,0,0,0.426133137080504,0,0,0,0,0,0,0,0.6970372701606,0,0,0.869932992075073,0,0,0,0.632758849437452,0,0.255897791311334,3.85145089230528,0,0,0,0,0.235624804691373,0,0,0,0,6.09283724078211,8.45201174054043,0,0,0,7.16774946609961,0,0,1.73632660280006,9.83842128069949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0.851692475380653,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,1.46909527343233,0,0,0,0.530745387020035,1.83309043480088,0,0,0,0.269604531922708,0.802577647298789,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0,1.86638744515045,0,0,0,0,0,0,0.694238953340524,0.489961987071888,0.174118413160805,2.27144668714639,0.343972064943233,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.426905989478705,0,0,5.95590300062761,0,0,0,0.707082103850386,0,0,0,11.8469741859623,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.630445658393585,0.472091293214983,0,0,0,0,0,0,0,0,0,0,0,2.21504428321048,4.98573202688553,0,0,0,0,0.513260513652988,0,1.9221734262185,1.41483874589699,0.414239055347196,0,0,0,0,1.63205341010842,0,0.612691153526923,0.983617892129413,0,0,0,0,0,0.221858103073705,1.05563885000352,0,0,2.72968411574966,0,0,0,0.144921028610825,1.94031243752936,0.934853239388898,0.554805861502613,0,0,0,0.457680136793847,0.302461847526478,1.70980920641059,0,0.318593534327405,0,1.08684069813382,0,1.32920857278997,0.521745061811734,5.40927392389986,3.04644169735036,5.2893195316606,0,5.26311729508193,0,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0.489473409012935,0,0.308801447160972,1.31570429747224,0.176689145945881,0.771656153083659,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0,0,0,1.20336525358812,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.596493833314104,0.846774100381858,0,0,0,0.223710863595585,0,0,0,0.102662806856247,0,0.485710993059139,0,0,1.42704108933082,0,0,0.150962843566674,1.31196068783506,1.5299169235277,0,0,0,0.392616934229891,0.297046400327086,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0,0,0,0,0.717222053926764,0.332660356546013,0,0,0,0,0,0.488965776731466,0,0,1.00636896795513,0 | |||
|short_description=p4@HOXA5 | |||
}} |
Latest revision as of 01:29, 18 September 2015
Short description: | p4@HOXA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXA5_5end |
Coexpression cluster: | C1992_Mesothelial_glioma_Smooth_Basophils_mesenchymal_Neutrophils_gastric |
Association with transcript: | 11bp_to_AB587591, BT009744, CR542256, CR542277, DQ890593, DQ893761_5end |
EntrezGene: | HOXA5 |
HGNC: | 5106 |
UniProt: | P20719Q6FG31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 3.56e-10 | 3 |
adipocyte of omentum tissue | 5.49e-10 | 3 |
visceral preadipocyte | 7.50e-09 | 3 |
smooth muscle cell of the internal thoracic artery | 6.06e-08 | 2 |
smooth muscle cell of trachea | 1.28e-07 | 2 |
annulus pulposus cell | 1.28e-07 | 2 |
smooth muscle cell of the subclavian artery | 8.95e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 4.28e-16 | 5 |
symphysis | 4.28e-16 | 5 |
nonsynovial joint | 4.28e-16 | 5 |
fibrous joint | 4.28e-16 | 5 |
cartilaginous joint | 4.28e-16 | 5 |
developing mesenchymal condensation | 4.28e-16 | 5 |
pre-cartilage condensation | 4.28e-16 | 5 |
cartilaginous condensation | 4.28e-16 | 5 |
cartilage element | 4.28e-16 | 5 |
post-cranial axial skeletal system | 4.28e-16 | 5 |
vertebral column | 4.28e-16 | 5 |
intervertebral disk | 4.28e-16 | 5 |
intervertebral joint | 4.28e-16 | 5 |
omentum | 1.01e-12 | 6 |
peritoneum | 1.01e-12 | 6 |
abdominal cavity | 1.01e-12 | 6 |
visceral peritoneum | 1.01e-12 | 6 |
nucleus pulposus | 3.56e-10 | 3 |
axial mesoderm | 3.56e-10 | 3 |
notochord | 3.56e-10 | 3 |
chordamesoderm | 3.56e-10 | 3 |
articulation | 6.47e-10 | 8 |
skeletal joint | 6.47e-10 | 8 |
articular system | 6.47e-10 | 8 |
internal thoracic artery | 6.06e-08 | 2 |
annulus fibrosus | 1.28e-07 | 2 |
fibrocartilage | 1.28e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.28e-07 | 2 |
subdivision of trunk | 5.67e-07 | 112 |
thoracic segment blood vessel | 8.95e-07 | 5 |
subclavian artery | 8.95e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-07 | 14 |