FFCP PHASE2:Hg19::chr7:27183291..27183324,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3202 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5106 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5106 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P20719 | ||
|association_with_transcript=-4bp_to_ENST00000222726,NM_019102,uc003syn.1_5end | |association_with_transcript=-4bp_to_ENST00000222726,NM_019102,uc003syn.1_5end | ||
|cluster_id=chr7:27183291..27183324,- | |cluster_id=chr7:27183291..27183324,- |
Latest revision as of 01:31, 18 September 2015
Short description: | p1@HOXA5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA5_5end |
Coexpression cluster: | C4680_Smooth_clear_gastric_Mesothelial_glioma_rectum_melanoma |
Association with transcript: | -4bp_to_ENST00000222726, NM_019102, uc003syn.1_5end |
EntrezGene: | HOXA5 |
HGNC: | 5106 |
UniProt: | P20719 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HOXA5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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kidney cell | 2.36e-13 | 17 |
kidney epithelial cell | 2.36e-13 | 17 |
epithelial cell of nephron | 1.16e-11 | 15 |
blood vessel endothelial cell | 1.50e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.50e-09 | 18 |
kidney tubule cell | 1.53e-09 | 10 |
nephron tubule epithelial cell | 1.53e-09 | 10 |
kidney cortical cell | 3.53e-09 | 12 |
renal cortical epithelial cell | 3.53e-09 | 12 |
mesodermal cell | 4.83e-09 | 121 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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subdivision of trunk | 7.54e-21 | 112 |
cavitated compound organ | 2.62e-18 | 31 |
kidney | 8.03e-16 | 26 |
kidney mesenchyme | 8.03e-16 | 26 |
upper urinary tract | 8.03e-16 | 26 |
kidney rudiment | 8.03e-16 | 26 |
kidney field | 8.03e-16 | 26 |
excretory tube | 9.64e-13 | 16 |
kidney epithelium | 9.64e-13 | 16 |
trunk | 1.29e-12 | 199 |
Showing 1 to 10 of 50 entries