FFCP PHASE1:Hg19::chr21:31588401..31588433,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9073 | |EntrezGene=9073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2050 | |HGNC=2050 | ||
|TSSclassifier=strong | |||
|UniProt=P56748,F5H2X4 | |UniProt=P56748,F5H2X4 | ||
|association_with_transcript=-10bp_to_ENST00000399899,ENST00000536721_5end | |association_with_transcript=-10bp_to_ENST00000399899,ENST00000536721_5end | ||
|cluster_id=chr21:31588401..31588433,- | |||
|coexpression_cluster_id=C1877 | |coexpression_cluster_id=C1877 | ||
|description=CAGE_peak_3_at_CLDN8_5end | |description=CAGE_peak_3_at_CLDN8_5end | ||
|id=chr21:31588401..31588433,- | |id=chr21:31588401..31588433,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;7.27e-09;1!UBERON:0009143;1.10e-08;1!UBERON:0008801;1.10e-08;1!UBERON:0003124;1.10e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@CLDN8 | |short_description=p3@CLDN8 | ||
}} | }} |
Latest revision as of 01:57, 18 September 2015
Short description: | p3@CLDN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLDN8_5end |
Coexpression cluster: | C1877_kidney_cervical_salivary_parotid_submaxillary_epididymis_thyroid |
Association with transcript: | -10bp_to_ENST00000399899, ENST00000536721_5end |
EntrezGene: | CLDN8 |
HGNC: | 2050 |
UniProt: | P56748F5H2X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.47e-16 | 2 |
throat | 2.99e-15 | 2 |
adult organism | 6.16e-15 | 114 |
saliva-secreting gland | 8.45e-12 | 6 |
gland of oral region | 8.45e-12 | 6 |
gland of foregut | 8.45e-12 | 6 |
oral gland | 8.45e-12 | 6 |
oral cavity | 8.45e-12 | 6 |
male genital duct | 1.41e-10 | 3 |
internal male genitalia | 1.41e-10 | 3 |
epididymis | 7.01e-09 | 1 |
submandibular gland | 7.56e-09 | 1 |
submandibular gland primordium | 7.56e-09 | 1 |
parotid gland | 1.02e-08 | 1 |
cheek | 1.02e-08 | 1 |
parotid gland primordium | 1.02e-08 | 1 |
surface | 2.29e-08 | 1 |
lower lobe of right lung | 2.46e-08 | 1 |
right lung lobe | 2.46e-08 | 1 |
lower lobe of lung | 2.46e-08 | 1 |
lobe of lung | 2.46e-08 | 1 |
right lung | 2.46e-08 | 1 |
vas deferens | 3.06e-08 | 1 |
spermatic cord | 3.06e-08 | 1 |
tonsil | 3.53e-08 | 1 |
mucosa-associated lymphoid tissue | 3.53e-08 | 1 |
lymphoid tissue | 3.53e-08 | 1 |
tonsillar ring | 3.53e-08 | 1 |
duct of male reproductive system | 3.80e-08 | 4 |
gland of gut | 2.93e-07 | 10 |
endoderm-derived structure | 3.80e-07 | 160 |
endoderm | 3.80e-07 | 160 |
presumptive endoderm | 3.80e-07 | 160 |
internal genitalia | 4.54e-07 | 25 |
digestive system | 5.81e-07 | 145 |
digestive tract | 5.81e-07 | 145 |
primitive gut | 5.81e-07 | 145 |