FFCP PHASE1:Hg19::chr7:27213872..27213886,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |EntrezGene=3206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |HGNC=5100 | ||
|TSSclassifier=strong | |||
|UniProt=Q5I0Y5 | |UniProt=Q5I0Y5 | ||
|association_with_transcript=27bp_to_ENST00000381834_5end | |association_with_transcript=27bp_to_ENST00000381834_5end | ||
|cluster_id=chr7:27213872..27213886,- | |||
|description=CAGE_peak_4_at_HOXA10_5end | |description=CAGE_peak_4_at_HOXA10_5end | ||
|id=chr7:27213872..27213886,- | |id=chr7:27213872..27213886,- | ||
|ontology_enrichment_celltype=CL:0002620!6.96e-12!23;CL:1000507!1.03e-07!12;CL:1000494!1.03e-07!12 | |ontology_enrichment_celltype=CL:0002620!6.96e-12!23;CL:1000507!1.03e-07!12;CL:1000494!1.03e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000135;1.04e-09;3!CL:0000388;1.04e-09;3!CL:1000507;4.81e-08;10!CL:1000494;4.81e-08;10!CL:0000650;6.26e-08;2!CL:1000500;6.26e-08;2!CL:1000618;6.26e-08;2!CL:1001318;6.26e-08;2!CL:0002173;6.26e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.09e-09,3;CL:0000388,1.09e-09,3;CL:1000507,6.16e-08,10;CL:1000494,6.16e-08,10;CL:0000650,8.09e-08,2;CL:1000500,8.09e-08,2;CL:1000618,8.09e-08,2;CL:1001318,8.09e-08,2;CL:0002173,8.09e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;3.08e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.25e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0006554!9.26e-14!44;UBERON:0001008!2.85e-13!45;UBERON:0000489!5.23e-10!32;UBERON:0002113!5.36e-10!27;UBERON:0003918!5.36e-10!27;UBERON:0005095!5.36e-10!27;UBERON:0007687!5.36e-10!27;UBERON:0009773!1.03e-07!12;UBERON:0001231!1.03e-07!12;UBERON:0004810!1.03e-07!12;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45;UBERON:0004905!3.73e-07!5;UBERON:0000982!3.73e-07!5;UBERON:0004770!3.73e-07!5 | |ontology_enrichment_uberon=UBERON:0006554!9.26e-14!44;UBERON:0001008!2.85e-13!45;UBERON:0000489!5.23e-10!32;UBERON:0002113!5.36e-10!27;UBERON:0003918!5.36e-10!27;UBERON:0005095!5.36e-10!27;UBERON:0007687!5.36e-10!27;UBERON:0009773!1.03e-07!12;UBERON:0001231!1.03e-07!12;UBERON:0004810!1.03e-07!12;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45;UBERON:0004905!3.73e-07!5;UBERON:0000982!3.73e-07!5;UBERON:0004770!3.73e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.04e-09;3!UBERON:0000043;1.04e-09;3!UBERON:0007845;1.04e-09;3!UBERON:0004211;4.81e-08;10!UBERON:0009773;4.81e-08;10!UBERON:0001231;4.81e-08;10!UBERON:0004810;4.81e-08;10!UBERON:0003567;6.26e-08;2!UBERON:0003838;6.26e-08;2!UBERON:0003586;6.26e-08;2!UBERON:0005169;6.26e-08;2!UBERON:0002321;6.26e-08;2!UBERON:0005215;6.26e-08;2!UBERON:0002303;6.26e-08;2!UBERON:0002319;6.26e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-09,3;UBERON:0000043,1.09e-09,3;UBERON:0007845,1.09e-09,3;UBERON:0004810,6.16e-08,10;UBERON:0003567,8.09e-08,2;UBERON:0003838,8.09e-08,2;UBERON:0003586,8.09e-08,2;UBERON:0005169,8.09e-08,2;UBERON:0002321,8.09e-08,2;UBERON:0005215,8.09e-08,2;UBERON:0002303,8.09e-08,2;UBERON:0002319,8.09e-08,2 | |||
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| ||
|short_description=p4@HOXA10 | |short_description=p4@HOXA10 | ||
}} | }} |
Latest revision as of 01:58, 18 September 2015
Short description: | p4@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000381834_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | Q5I0Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.09e-09 | 3 |
tendon cell | 1.09e-09 | 3 |
kidney tubule cell | 6.16e-08 | 10 |
nephron tubule epithelial cell | 6.16e-08 | 10 |
mesangial cell | 8.09e-08 | 2 |
kidney interstitial cell | 8.09e-08 | 2 |
juxtaglomerular complex cell | 8.09e-08 | 2 |
renal interstitial pericyte | 8.09e-08 | 2 |
extraglomerular mesangial cell | 8.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.09e-09 | 3 |
tendon | 1.09e-09 | 3 |
regular connective tissue | 1.09e-09 | 3 |
nephron tubule epithelium | 6.16e-08 | 10 |
abdomen connective tissue | 8.09e-08 | 2 |
abdominal segment connective tissue | 8.09e-08 | 2 |
trunk connective tissue | 8.09e-08 | 2 |
interstitial tissue | 8.09e-08 | 2 |
extraglomerular mesangium | 8.09e-08 | 2 |
kidney interstitium | 8.09e-08 | 2 |
juxtaglomerular apparatus | 8.09e-08 | 2 |
mesangium | 8.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.25e-08 | 31 |