FFCP PHASE1:Hg19::chr1:160321120..160321130,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23385 | |EntrezGene=23385 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17091 | |HGNC=17091 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000424754_5end | |association_with_transcript=0bp_to_ENST00000424754_5end | ||
|cluster_id=chr1:160321120..160321130,+ | |||
|description=CAGE_peak_14_at_NCSTN_5end | |description=CAGE_peak_14_at_NCSTN_5end | ||
|id=chr1:160321120..160321130,+ | |id=chr1:160321120..160321130,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.62e-23;1!CL:0002625;2.62e-23;1!CL:0000216;2.62e-23;1!CL:0000775;1.12e-08;3!CL:0000307;1.12e-08;3!CL:0002563;8.14e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.67e-23,1;CL:0002625,1.67e-23,1;CL:0000216,1.67e-23,1;CL:0000775,1.21e-08,3;CL:0000068,1.40e-08,3;CL:0000069,1.40e-08,3;CL:0000307,1.40e-08,3;CL:0000377,1.40e-08,3;CL:0002563,9.11e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.31e-12;2!UBERON:0004161;5.41e-09;11!CL:0000377;1.12e-08;3!UBERON:0009497;9.51e-08;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.12e-08;3!DOID:127;1.12e-08;3!DOID:0060072;8.14e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.96e-09,3;DOID:127,8.96e-09,3;DOID:0060072,6.87e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.62e-23;1!UBERON:0001301;2.62e-23;1!UBERON:0001343;2.62e-23;1!UBERON:0004910;2.62e-23;1!UBERON:0004813;2.62e-23;1!UBERON:0005904;5.74e-23;4!UBERON:0003135;1.10e-18;11!UBERON:0004909;2.31e-12;2!UBERON:0000473;5.22e-12;8!UBERON:0000058;8.45e-10;10!UBERON:0003101;1.09e-09;22!UBERON:0000079;1.09e-09;22!UBERON:0006947;1.12e-08;3!UBERON:0004054;1.12e-08;3!UBERON:0003133;7.52e-07;44!UBERON:0001242;8.14e-07;4!UBERON:0001262;8.14e-07;4!UBERON:0004786;8.14e-07;4!UBERON:0004808;8.14e-07;4!UBERON:0001277;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.67e-23,1;UBERON:0001343,1.67e-23,1;UBERON:0004910,1.67e-23,1;UBERON:0005154,1.67e-23,1;UBERON:0005295,1.67e-23,1;UBERON:0004813,1.67e-23,1;UBERON:0005297,1.67e-23,1;UBERON:0005294,1.67e-23,1;UBERON:0010141,1.67e-23,1;UBERON:0005891,1.67e-23,1;UBERON:0001301,6.40e-23,1;UBERON:0005904,7.18e-23,4;UBERON:0003135,9.78e-19,11;UBERON:0004909,1.85e-12,2;UBERON:0000473,3.74e-12,8;UBERON:0003101,1.03e-09,22;UBERON:0000079,1.03e-09,22;UBERON:0004876,5.87e-09,11;UBERON:0006947,1.51e-08,3;UBERON:0004054,1.51e-08,3;UBERON:0003133,8.88e-08,48;UBERON:0001242,9.11e-07,4;UBERON:0001262,9.11e-07,4;UBERON:0004786,9.11e-07,4;UBERON:0004808,9.11e-07,4;UBERON:0001277,9.11e-07,4 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0.795285947051099,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0,0,0.749007023947182,0,1.24324654030811,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.280660094433074,0.512556597022804,0,0.160853921143607,0,0,0,0,0,0,0.120859449591622,0.601519410909855,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.412164046590889,0.0915694648183434,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0.707027159768564,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0.183195186803725,0.533034776018635,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,1.04836000945218,0.171986032471617,0,0,0.164230914106418,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0,0.105600336519406,0,0,0,0,0,1.62899880526114,0,0,0,0.082092520749339,0.170388021785422,0,1.31897010310274,1.32506888912221,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.332787154610557,0,0,0,0.151649117541648,0.570930667089935,0,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0.260994291965212,0,0,0.489473409012935,0.179088841081487,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2249819094128,0,0,0,0.205116364240755,0,0,0.322951291263702,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0.526472298444801,0.20170506870352,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0.171488009437418,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.3414369541879,0,0,0,0.0852134047591577,0.846774100381858,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0.233939463462106,0,0.118920090777569,0,0.109940516745429,0.150962843566674,0.385870790539723,0.218559560503957,0,0,0,0,0.594092800654172,0,0,0.281951753939561,0.0644578879735772,0.0999411559249289,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0.109265571963696,0.126698501011437,0.101988829741982,0.801652215796681,0,0.250707539292375,1.89446745545599,0,0,0.103432995861895,0,0,0.129177819672012,0,0,0.190941474834495,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p14@NCSTN | |short_description=p14@NCSTN | ||
}} | }} |
Latest revision as of 02:11, 18 September 2015
Short description: | p14@NCSTN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_NCSTN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424754_5end |
EntrezGene: | NCSTN |
HGNC: | 17091 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.67e-23 | 1 |
seminiferous tubule epithelial cell | 1.67e-23 | 1 |
Sertoli cell | 1.67e-23 | 1 |
neutrophil | 1.21e-08 | 3 |
duct epithelial cell | 1.40e-08 | 3 |
branched duct epithelial cell | 1.40e-08 | 3 |
tracheal epithelial cell | 1.40e-08 | 3 |
tracheoblast | 1.40e-08 | 3 |
intestinal epithelial cell | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.67e-23 | 1 |
seminiferous tubule of testis | 1.67e-23 | 1 |
epithelium of male gonad | 1.67e-23 | 1 |
epithelial cord | 1.67e-23 | 1 |
sex cord | 1.67e-23 | 1 |
seminiferous tubule epithelium | 1.67e-23 | 1 |
testis sex cord | 1.67e-23 | 1 |
genital ridge | 1.67e-23 | 1 |
primitive sex cord of indifferent gonad | 1.67e-23 | 1 |
coelomic epithelium | 1.67e-23 | 1 |
epididymis | 6.40e-23 | 1 |
duct of male reproductive system | 7.18e-23 | 4 |
male reproductive organ | 9.78e-19 | 11 |
epithelium of gonad | 1.85e-12 | 2 |
testis | 3.74e-12 | 8 |
male organism | 1.03e-09 | 22 |
male reproductive system | 1.03e-09 | 22 |
urogenital ridge | 5.87e-09 | 11 |
male genital duct | 1.51e-08 | 3 |
internal male genitalia | 1.51e-08 | 3 |
reproductive organ | 8.88e-08 | 48 |
intestinal mucosa | 9.11e-07 | 4 |
wall of intestine | 9.11e-07 | 4 |
gastrointestinal system mucosa | 9.11e-07 | 4 |
gastrointestinal system epithelium | 9.11e-07 | 4 |
intestinal epithelium | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.96e-09 | 3 |
leiomyoma | 8.96e-09 | 3 |
benign neoplasm | 6.87e-07 | 4 |