FFCP PHASE1:Hg19::chr7:27225038..27225057,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=24957 | |HGNC=24957 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENST00000517723_5end | |association_with_transcript=6bp_to_ENST00000517723_5end | ||
|cluster_id=chr7:27225038..27225057,+ | |||
|coexpression_cluster_id=C2891 | |||
|description=CAGE_peak_1_at_HOXA11-AS1_5end | |description=CAGE_peak_1_at_HOXA11-AS1_5end | ||
|id=chr7:27225038..27225057,+ | |id=chr7:27225038..27225057,+ | ||
|ontology_enrichment_celltype=CL:1000507!8.34e-09!12;CL:1000494!8.34e-09!12;CL:1000497!1.22e-08!18;CL:0002518!1.22e-08!18;CL:1000449!1.41e-08!16 | |ontology_enrichment_celltype=CL:1000507!8.34e-09!12;CL:1000494!8.34e-09!12;CL:1000497!1.22e-08!18;CL:0002518!1.22e-08!18;CL:1000449!1.41e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.75e-15;10!CL:1000494;1.75e-15;10!CL:1000497;1.21e-13;17!CL:0002518;1.21e-13;17!CL:1000449;1.71e-13;15!CL:0002681;2.09e-09;12!CL:0002584;2.09e-09;12!CL:0002543;4.66e-08;6!CL:0000244;3.69e-07;4!CL:0000731;3.69e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.24e-15,10;CL:1000494,2.24e-15,10;CL:1000497,1.51e-13,17;CL:0002518,1.51e-13,17;CL:1000449,2.10e-13,15;CL:0002681,2.39e-09,12;CL:0002584,2.39e-09,12;CL:0002543,3.22e-08,6;CL:0000244,3.01e-07,4;CL:0000731,3.01e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!4.21e-24!45;UBERON:0006554!1.47e-23!44;UBERON:0003064!7.75e-16!37;UBERON:0000489!4.82e-13!32;UBERON:0002113!2.83e-12!27;UBERON:0003918!2.83e-12!27;UBERON:0005095!2.83e-12!27;UBERON:0007687!2.83e-12!27;UBERON:0000080!4.21e-10!18;UBERON:0002120!4.21e-10!18;UBERON:0004875!4.21e-10!18;UBERON:0005721!4.21e-10!18;UBERON:0005754!4.21e-10!18;UBERON:0007297!4.21e-10!18;UBERON:0004876!5.33e-10!20;UBERON:0001046!8.24e-10!19;UBERON:0000162!1.12e-09!14;UBERON:0001353!1.12e-09!14;UBERON:0000163!1.12e-09!14;UBERON:0006866!1.12e-09!14;UBERON:0000164!1.12e-09!14;UBERON:0000931!1.12e-09!14;UBERON:0006555!2.64e-09!17;UBERON:0005103!2.64e-09!17;UBERON:0000083!2.64e-09!17;UBERON:0009201!2.64e-09!17;UBERON:0004819!2.64e-09!17;UBERON:0006553!2.64e-09!17;UBERON:0003074!2.64e-09!17;UBERON:0003060!2.64e-09!17;UBERON:0001737!4.71e-09!9;UBERON:0009773!8.34e-09!12;UBERON:0001231!8.34e-09!12;UBERON:0004810!8.34e-09!12;UBERON:0004122!8.83e-09!15;UBERON:0004211!1.41e-08!16;UBERON:0001285!1.41e-08!16;UBERON:0007684!1.41e-08!16;UBERON:0003220!1.41e-08!16;UBERON:0004208!1.41e-08!16;UBERON:0003937!3.76e-08!12;UBERON:0005399!3.76e-08!12;UBERON:0003887!5.25e-08!21;UBERON:0000058!1.17e-07!26;UBERON:0005156!1.64e-07!59;UBERON:0000990!1.64e-07!59;UBERON:0003101!1.83e-07!22;UBERON:0000079!1.83e-07!22;UBERON:0002367!2.47e-07!11;UBERON:0010147!2.47e-07!11;UBERON:0009846!2.47e-07!11;UBERON:0003353!2.47e-07!11;UBERON:0004902!2.47e-07!11;UBERON:0003820!2.47e-07!11;UBERON:0009847!2.47e-07!11;UBERON:0000059!7.44e-07!11 | |ontology_enrichment_uberon=UBERON:0001008!4.21e-24!45;UBERON:0006554!1.47e-23!44;UBERON:0003064!7.75e-16!37;UBERON:0000489!4.82e-13!32;UBERON:0002113!2.83e-12!27;UBERON:0003918!2.83e-12!27;UBERON:0005095!2.83e-12!27;UBERON:0007687!2.83e-12!27;UBERON:0000080!4.21e-10!18;UBERON:0002120!4.21e-10!18;UBERON:0004875!4.21e-10!18;UBERON:0005721!4.21e-10!18;UBERON:0005754!4.21e-10!18;UBERON:0007297!4.21e-10!18;UBERON:0004876!5.33e-10!20;UBERON:0001046!8.24e-10!19;UBERON:0000162!1.12e-09!14;UBERON:0001353!1.12e-09!14;UBERON:0000163!1.12e-09!14;UBERON:0006866!1.12e-09!14;UBERON:0000164!1.12e-09!14;UBERON:0000931!1.12e-09!14;UBERON:0006555!2.64e-09!17;UBERON:0005103!2.64e-09!17;UBERON:0000083!2.64e-09!17;UBERON:0009201!2.64e-09!17;UBERON:0004819!2.64e-09!17;UBERON:0006553!2.64e-09!17;UBERON:0003074!2.64e-09!17;UBERON:0003060!2.64e-09!17;UBERON:0001737!4.71e-09!9;UBERON:0009773!8.34e-09!12;UBERON:0001231!8.34e-09!12;UBERON:0004810!8.34e-09!12;UBERON:0004122!8.83e-09!15;UBERON:0004211!1.41e-08!16;UBERON:0001285!1.41e-08!16;UBERON:0007684!1.41e-08!16;UBERON:0003220!1.41e-08!16;UBERON:0004208!1.41e-08!16;UBERON:0003937!3.76e-08!12;UBERON:0005399!3.76e-08!12;UBERON:0003887!5.25e-08!21;UBERON:0000058!1.17e-07!26;UBERON:0005156!1.64e-07!59;UBERON:0000990!1.64e-07!59;UBERON:0003101!1.83e-07!22;UBERON:0000079!1.83e-07!22;UBERON:0002367!2.47e-07!11;UBERON:0010147!2.47e-07!11;UBERON:0009846!2.47e-07!11;UBERON:0003353!2.47e-07!11;UBERON:0004902!2.47e-07!11;UBERON:0003820!2.47e-07!11;UBERON:0009847!2.47e-07!11;UBERON:0000059!7.44e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;3.48e-21;30!UBERON:0001008;3.48e-21;30!UBERON:0004211;1.75e-15;10!UBERON:0009773;1.75e-15;10!UBERON:0001231;1.75e-15;10!UBERON:0004810;1.75e-15;10!UBERON:0000489;5.78e-14;29!UBERON:0002113;8.71e-14;24!UBERON:0011143;8.71e-14;24!UBERON:0006555;1.71e-13;15!UBERON:0004819;1.71e-13;15!UBERON:0001285;1.71e-13;15!UBERON:0007684;1.71e-13;15!UBERON:0001737;2.28e-12;9!UBERON:0001557;2.28e-12;9!UBERON:0010260;2.18e-11;9!UBERON:0001225;2.09e-09;12!UBERON:0008987;2.09e-09;12!UBERON:0003937;2.32e-09;12!UBERON:0005399;2.32e-09;12!UBERON:0001638;8.46e-09;9!UBERON:0003920;8.46e-09;9!UBERON:0004582;8.46e-09;9!UBERON:0000365;1.54e-08;5!UBERON:0002367;2.62e-08;11!UBERON:0010147;2.62e-08;11!UBERON:0000059;7.17e-08;11!UBERON:0003101;2.16e-07;22!UBERON:0000079;2.16e-07;22!UBERON:0001851;4.06e-07;15!UBERON:0000353;4.06e-07;15!UBERON:0005910;5.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,5.34e-27,47;UBERON:0001008,3.26e-26,48;UBERON:0000489,6.36e-16,31;UBERON:0002113,7.53e-16,26;UBERON:0003918,7.53e-16,26;UBERON:0011143,7.53e-16,26;UBERON:0005095,7.53e-16,26;UBERON:0007687,7.53e-16,26;UBERON:0004810,2.24e-15,10;UBERON:0006555,1.76e-14,16;UBERON:0004819,1.76e-14,16;UBERON:0004211,2.10e-13,15;UBERON:0009773,2.10e-13,15;UBERON:0001231,2.10e-13,15;UBERON:0001285,2.10e-13,15;UBERON:0007684,2.10e-13,15;UBERON:0004208,2.10e-13,15;UBERON:0003064,2.20e-12,28;UBERON:0001737,2.80e-12,9;UBERON:0010260,1.08e-11,9;UBERON:0000162,5.68e-10,14;UBERON:0001353,5.68e-10,14;UBERON:0000163,5.68e-10,14;UBERON:0006866,5.68e-10,14;UBERON:0000164,5.68e-10,14;UBERON:0000931,5.68e-10,14;UBERON:0001046,1.26e-09,19;UBERON:0003104,1.34e-09,160;UBERON:0009142,1.34e-09,160;UBERON:0003937,1.53e-09,12;UBERON:0005399,1.53e-09,12;UBERON:0001225,2.39e-09,12;UBERON:0008987,2.39e-09,12;UBERON:0004122,3.85e-09,15;UBERON:0001638,4.50e-09,9;UBERON:0003920,4.50e-09,9;UBERON:0004582,4.50e-09,9;UBERON:0000365,1.32e-08,5;UBERON:0002367,2.07e-08,11;UBERON:0010147,2.07e-08,11;UBERON:0009846,2.07e-08,11;UBERON:0003353,2.07e-08,11;UBERON:0004902,2.07e-08,11;UBERON:0003820,2.07e-08,11;UBERON:0009847,2.07e-08,11;UBERON:0000059,4.88e-08,11;UBERON:0003101,1.60e-07,22;UBERON:0000079,1.60e-07,22;UBERON:0001851,4.50e-07,15;UBERON:0000353,4.50e-07,15;UBERON:0005910,4.62e-07,6;UBERON:0002066,9.55e-07,5 | |||
|phase1_expression=0,0.428201047781966,0,1.0007329835313,0,0,0,0,1.04474251279935,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,3.50936537445123,2.17269778441236,1.5905718941022,2.91980922181582,0,0,0,2.0956652079634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20848795132744,0.760272105718513,0,0.735326160691737,0,1.51809538082936,1.57170560838319,2.13961812918312,6.13266549863533,1.89853131913626,2.93122790288652,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0.469737994575059,0,0.140450806702248,0,0,0,0,0,0.910161361938026,1.43723628363248,0,0,0,0,0,0,0,0,0.427114777637135,0.423863802319124,0,0.618315175430633,2.31876486041066,5.3973888336161,0.506328996723799,1.26668106709558,2.01947019395292,1.74894807420369,0,2.84007674013291,1.81353776809752,1.86516651541536,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,3.07597680103594,2.86593973132773,3.37415441836875,3.19852520923942,2.17879444092406,3.08451804844426,2.83145747136345,2.15843611637881,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,2.58543431515556,10.7296933755565,0,9.57377219705534,9.36066932202295,2.31486636835928,0,2.66422179016099,0,28.7589450857465,7.40916303102692,0,0,3.95975936466715,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,13.6444502433591,2.0694614258501,0.664225598535437,0.553107505625109,11.1211026519146,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,1.02341449813341,0,0,0.771048469013278,0,0,0,0,0,5.61418116849198,0.920809889358963,2.41110341145674,1.63882051206045,4.72047893853927,3.60959690325929,2.15642943892361,6.27479815341484,10.2297457257282,4.11651352682215,0,0,1.29549549661284,4.62681758070868,8.12839312631558,12.0405545725165,3.05851527654046,2.49322802678617,4.47749509444357,0,0,0,0,0,0.206082023295445,1.55668090191184,2.0627374980147,0,0,0,0.48335359146061,0,0,0,1.28904293841928,0.725083469571143,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39617372749944,2.47083326762449,3.53437207037059,0,0,0,0,0.243713489631284,0,6.6884956589913,4.80778468642623,0,0,0,0,0,0,2.63783490051515,2.78841148289775,3.94373843545138,1.72093622644862,2.94747123039363,3.5667105148125,3.54761064070598,0,0.329294892959902,0,0,0,0,0,0.282431402330337,7.74909670808214,8.42357378338128,7.98174276366016,1.60806380144872,0,0,0,0,0,0,0,0,0.427296284509893,0,1.22520107990516,0,0,0,0,0,0,2.11673582723883,0.324621940274555,1.12318871245384,0.684704037099577,0,5.01268954180134,4.23229444504008,0.1605880751037,0.201799707191048,7.66523227842587,0,6.75929681478608,5.81557880520281,6.84081481018825,14.8494952505551,0,0,0,0,0,5.98849729306303,0,0,0,3.12549761487054,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0,0,5.22810049875748,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,3.34616986268648,9.54183205447084,0,0,0,0,0,7.14461228534526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,5.21899630569701,5.49927130440263,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0,0,2.70582154946087,9.74668999134123,0,0,0,0,0,0,0.520679215005393,0,0,2.27144668714639,1.37588825977293,0.580537987734511,0.65780385377567,1.06750094169172,0,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,5.87491387111979,0,0,1.53532157855556,0,0,0,11.402991636828,6.91377192961014,7.83809664262582,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0.298509605773748,0.233713309847224,0,0.947015026375446,1.25783950876288,0.889811221596536,0,0,0,0,0,0,0.155262956876259,0,0,2.08698024724694,0,0.380805212168795,0,0,0.429642228169954,0,3.98095888698616,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0.211312123358627,0,1.60037594541211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.709618961301111,0,0.171488009437418,0,0,0,3.89309906622242,6.82889907799472,0,1.96190514319652,2.73947616152849,0,3.34426181520935,0,0,0.348724276104376,1.04314963381548,3.20684545892101,0,0,0,0,0.236664001461131,0.255640214277473,2.9637093513365,0,0,0,0,0,0,0.647428837187895,0.718639647993729,1.1598144313382,0,0,17.1097666638777,0,1.1294608203896,0.109940516745429,0,0,0,33.8628453380296,3.18692818280077,0,0,0,0.4226557275834,2.20905249094162,0,0,0,0,0,0,0,0,0,0.631086248772738,0,0,0,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0.18378979906969,0,0.4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| ||
|short_description=p1@HOXA11-AS1 | |short_description=p1@HOXA11-AS1 | ||
}} | }} |
Latest revision as of 02:14, 18 September 2015
Short description: | p1@HOXA11-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA11-AS1_5end |
Coexpression cluster: | C2891_Mesenchymal_uterus_smallcell_small_leiomyoma_cervix_acute |
Association with transcript: | 6bp_to_ENST00000517723_5end |
EntrezGene: | NA |
HGNC: | 24957 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.24e-15 | 10 |
nephron tubule epithelial cell | 2.24e-15 | 10 |
kidney cell | 1.51e-13 | 17 |
kidney epithelial cell | 1.51e-13 | 17 |
epithelial cell of nephron | 2.10e-13 | 15 |
kidney cortical cell | 2.39e-09 | 12 |
renal cortical epithelial cell | 2.39e-09 | 12 |
vein endothelial cell | 3.22e-08 | 6 |
transitional epithelial cell | 3.01e-07 | 4 |
urothelial cell | 3.01e-07 | 4 |