FFCP PHASE1:Hg19::chr7:27239703..27239715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3209 | |EntrezGene=3209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5102 | |HGNC=5102 | ||
|TSSclassifier=strong | |||
|UniProt=P31271,Q6DI00 | |UniProt=P31271,Q6DI00 | ||
|association_with_transcript=9bp_to_ENST00000222753,NM_000522,uc003szb.1_5end | |association_with_transcript=9bp_to_ENST00000222753,NM_000522,uc003szb.1_5end | ||
|cluster_id=chr7:27239703..27239715,- | |||
|coexpression_cluster_id=C4682 | |coexpression_cluster_id=C4682 | ||
|description=CAGE_peak_1_at_HOXA13_5end | |description=CAGE_peak_1_at_HOXA13_5end | ||
|id=chr7:27239703..27239715,- | |id=chr7:27239703..27239715,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002622;3.00e-10;3!CL:1000487;2.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,3.14e-10,3;CL:1000487,1.87e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;9.29e-08;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001046!1.30e-14!19;UBERON:0001737!4.52e-14!9;UBERON:0003101!3.48e-13!22;UBERON:0000079!3.48e-13!22;UBERON:0000162!4.03e-13!14;UBERON:0001353!4.03e-13!14;UBERON:0000163!4.03e-13!14;UBERON:0006866!4.03e-13!14;UBERON:0000164!4.03e-13!14;UBERON:0000931!4.03e-13!14;UBERON:0003937!4.51e-13!12;UBERON:0005399!4.51e-13!12;UBERON:0005156!1.80e-12!59;UBERON:0000990!1.80e-12!59;UBERON:0004122!4.94e-12!15;UBERON:0002367!1.39e-11!11;UBERON:0010147!1.39e-11!11;UBERON:0009846!1.39e-11!11;UBERON:0003353!1.39e-11!11;UBERON:0004902!1.39e-11!11;UBERON:0003820!1.39e-11!11;UBERON:0009847!1.39e-11!11;UBERON:0004175!4.23e-11!25;UBERON:0001008!4.34e-10!45;UBERON:0000059!6.84e-10!11;UBERON:0006554!3.17e-09!44;UBERON:0005795!3.32e-08!22;UBERON:0003975!4.11e-08!22;UBERON:0001155!1.98e-07!9;UBERON:0000995!4.15e-07!21;UBERON:0004921!9.18e-07!129;UBERON:0004185!9.18e-07!129 | |ontology_enrichment_uberon=UBERON:0001046!1.30e-14!19;UBERON:0001737!4.52e-14!9;UBERON:0003101!3.48e-13!22;UBERON:0000079!3.48e-13!22;UBERON:0000162!4.03e-13!14;UBERON:0001353!4.03e-13!14;UBERON:0000163!4.03e-13!14;UBERON:0006866!4.03e-13!14;UBERON:0000164!4.03e-13!14;UBERON:0000931!4.03e-13!14;UBERON:0003937!4.51e-13!12;UBERON:0005399!4.51e-13!12;UBERON:0005156!1.80e-12!59;UBERON:0000990!1.80e-12!59;UBERON:0004122!4.94e-12!15;UBERON:0002367!1.39e-11!11;UBERON:0010147!1.39e-11!11;UBERON:0009846!1.39e-11!11;UBERON:0003353!1.39e-11!11;UBERON:0004902!1.39e-11!11;UBERON:0003820!1.39e-11!11;UBERON:0009847!1.39e-11!11;UBERON:0004175!4.23e-11!25;UBERON:0001008!4.34e-10!45;UBERON:0000059!6.84e-10!11;UBERON:0006554!3.17e-09!44;UBERON:0005795!3.32e-08!22;UBERON:0003975!4.11e-08!22;UBERON:0001155!1.98e-07!9;UBERON:0000995!4.15e-07!21;UBERON:0004921!9.18e-07!129;UBERON:0004185!9.18e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.06e-24;9!UBERON:0001557;2.06e-24;9!UBERON:0003937;1.16e-19;12!UBERON:0005399;1.16e-19;12!UBERON:0002367;4.84e-17;11!UBERON:0010147;4.84e-17;11!UBERON:0003101;1.11e-14;22!UBERON:0000079;1.11e-14;22!UBERON:0000077;1.46e-11;27!UBERON:0004175;2.91e-10;21!UBERON:0005156;2.10e-09;59!UBERON:0000990;2.10e-09;59!UBERON:0000059;8.35e-09;11!UBERON:0003975;2.01e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.42e-24,9;UBERON:0001046,8.78e-24,19;UBERON:0000162,2.80e-20,14;UBERON:0001353,2.80e-20,14;UBERON:0000163,2.80e-20,14;UBERON:0006866,2.80e-20,14;UBERON:0000164,2.80e-20,14;UBERON:0000931,2.80e-20,14;UBERON:0003937,1.12e-19,12;UBERON:0005399,1.12e-19,12;UBERON:0004122,8.95e-19,15;UBERON:0002367,4.79e-17,11;UBERON:0010147,4.79e-17,11;UBERON:0009846,4.79e-17,11;UBERON:0003353,4.79e-17,11;UBERON:0004902,4.79e-17,11;UBERON:0003820,4.79e-17,11;UBERON:0009847,4.79e-17,11;UBERON:0003101,1.08e-14,22;UBERON:0000079,1.08e-14,22;UBERON:0005156,5.65e-14,59;UBERON:0000990,5.65e-14,59;UBERON:0003064,3.90e-13,28;UBERON:0000077,1.29e-10,29;UBERON:0001557,1.32e-10,19;UBERON:0001008,1.33e-10,48;UBERON:0004175,1.83e-10,25;UBERON:0006554,2.22e-09,47;UBERON:0004921,6.42e-09,118;UBERON:0000059,8.61e-09,11;UBERON:0005795,7.23e-08,22;UBERON:0003975,9.57e-08,22;UBERON:0004119,4.79e-07,160;UBERON:0000925,4.79e-07,160;UBERON:0006595,4.79e-07,160;UBERON:0001007,7.08e-07,145;UBERON:0001555,7.08e-07,145;UBERON:0007026,7.08e-07,145 | |||
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|short_description=p1@HOXA13 | |short_description=p1@HOXA13 | ||
}} | }} |
Latest revision as of 02:16, 18 September 2015
Short description: | p1@HOXA13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA13_5end |
Coexpression cluster: | C4682_small_cervix_uterus_prostate_Smooth_Prostate_smooth |
Association with transcript: | 9bp_to_ENST00000222753, NM_000522, uc003szb.1_5end |
EntrezGene: | HOXA13 |
HGNC: | 5102 |
UniProt: | P31271Q6DI00 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 3.14e-10 | 3 |
smooth muscle cell of prostate | 1.87e-07 | 2 |