FFCP PHASE1:Hg19::chr17:78120881..78120892,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:78120881..78120892,-
|short_description=p4@EIF4A3
|description=CAGE_peak_4_at_EIF4A3_5end
|association_with_transcript=-30bp_to_uc010wuc.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9775 | |EntrezGene=9775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18683 | |HGNC=18683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_uc010wuc.1_5end | |||
|cluster_id=chr17:78120881..78120892,- | |||
|description=CAGE_peak_4_at_EIF4A3_5end | |||
|id=chr17:78120881..78120892,- | |||
|ontology_enrichment_celltype=CL:0000548!9.00e-10!679;CL:0000004!9.00e-10!679;CL:0000255!9.00e-10!679;CL:0000063!2.35e-09!578;CL:0000012!2.52e-09!682;CL:0000557!3.69e-09!71;CL:0002194!3.88e-09!63;CL:0000576!3.88e-09!63;CL:0000040!3.88e-09!63;CL:0000559!3.88e-09!63;CL:0002009!4.65e-09!65;CL:0000839!4.90e-09!70;CL:0000860!1.97e-08!45;CL:0000766!3.09e-08!76;CL:0000066!3.78e-08!254;CL:0002087!4.52e-08!119;CL:0002031!7.81e-08!124;CL:0000738!2.85e-07!140;CL:0002057!5.20e-07!42;CL:0000037!6.03e-07!172;CL:0000566!6.03e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-10;33!CL:0002057;1.57e-10;33!CL:0000473;1.22e-08;39!CL:0000234;1.22e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.10e-08,67;CL:0002194,2.30e-08,59;CL:0000576,2.30e-08,59;CL:0000040,2.30e-08,59;CL:0000559,2.30e-08,59;CL:0002009,2.72e-08,61;CL:0000839,2.79e-08,66;CL:0000066,5.32e-08,253;CL:0002087,8.76e-08,115;CL:0000766,1.30e-07,72;CL:0002031,1.33e-07,120;CL:0000860,4.50e-07,42;CL:0002057,4.50e-07,42;CL:0000738,5.26e-07,136;CL:0000473,7.61e-07,48;CL:0000234,7.61e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.96e-26!239;DOID:162!1.98e-26!235;DOID:305!1.53e-21!106;DOID:0050687!4.74e-19!143;DOID:0050686!5.25e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:305;2.51e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.54e-26,239;DOID:162,2.59e-26,235;DOID:305,1.05e-21,106;DOID:0050687,4.28e-19,143;DOID:0050686,8.15e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0001474!7.75e-09!86;UBERON:0002371!2.75e-08!80;UBERON:0004765!1.35e-07!101;UBERON:0001434!1.35e-07!101;UBERON:0002405!2.92e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.49e-08,82;UBERON:0002371,1.59e-07,76;UBERON:0002405,5.31e-07,93;UBERON:0004765,8.58e-07,90 | |||
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| ||
|short_description=p4@EIF4A3 | |||
}} | }} |
Latest revision as of 03:31, 18 September 2015
Short description: | p4@EIF4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_EIF4A3_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_uc010wuc.1_5end |
EntrezGene: | EIF4A3 |
HGNC: | 18683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.10e-08 | 67 |
monopoietic cell | 2.30e-08 | 59 |
monocyte | 2.30e-08 | 59 |
monoblast | 2.30e-08 | 59 |
promonocyte | 2.30e-08 | 59 |
macrophage dendritic cell progenitor | 2.72e-08 | 61 |
myeloid lineage restricted progenitor cell | 2.79e-08 | 66 |
epithelial cell | 5.32e-08 | 253 |
nongranular leukocyte | 8.76e-08 | 115 |
myeloid leukocyte | 1.30e-07 | 72 |
hematopoietic lineage restricted progenitor cell | 1.33e-07 | 120 |
classical monocyte | 4.50e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.50e-07 | 42 |
leukocyte | 5.26e-07 | 136 |
defensive cell | 7.61e-07 | 48 |
phagocyte | 7.61e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.49e-08 | 82 |
bone marrow | 1.59e-07 | 76 |
immune system | 5.31e-07 | 93 |
skeletal element | 8.58e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.54e-26 | 239 |
cancer | 2.59e-26 | 235 |
carcinoma | 1.05e-21 | 106 |
cell type cancer | 4.28e-19 | 143 |
organ system cancer | 8.15e-10 | 137 |