FFCP PHASE1:Hg19::chr19:41765598..41765618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=558 | |EntrezGene=558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=905 | |HGNC=905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-380bp_to_X66029_5end | |association_with_transcript=-380bp_to_X66029_5end | ||
|cluster_id=chr19:41765598..41765618,+ | |||
|coexpression_cluster_id=C2490 | |||
|description=CAGE_peak_5_at_AXL_5end | |description=CAGE_peak_5_at_AXL_5end | ||
|id=chr19:41765598..41765618,+ | |id=chr19:41765598..41765618,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!7.45e-19!75;CL:0000222!3.24e-12!119;CL:0002620!2.17e-11!23;CL:0000220!2.21e-11!246;CL:0002321!3.76e-11!248;CL:0000077!1.19e-08!19;CL:0000548!5.64e-07!679;CL:0000004!5.64e-07!679;CL:0000255!5.64e-07!679;CL:0000144!7.37e-07!625 | |ontology_enrichment_celltype=CL:0000055!1.21e-25!180;CL:0000057!7.45e-19!75;CL:0000222!3.24e-12!119;CL:0002620!2.17e-11!23;CL:0000220!2.21e-11!246;CL:0002321!3.76e-11!248;CL:0000077!1.19e-08!19;CL:0000548!5.64e-07!679;CL:0000004!5.64e-07!679;CL:0000255!5.64e-07!679;CL:0000144!7.37e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0002620;8.18e-14;23!CL:0000057;1.03e-10;73!CL:0000077;6.14e-10;19!CL:1000497;3.45e-07;17!CL:0002518;3.45e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.99e-23,76;CL:0002620,4.36e-14,23;CL:0000077,9.52e-10,19;CL:0000222,2.25e-09,121;CL:1000497,1.91e-07,17;CL:0002518,1.91e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.18e-14!365;UBERON:0003102!1.08e-12!95;UBERON:0005256!1.87e-12!143;UBERON:0000481!6.26e-11!347;UBERON:0000119!1.60e-10!312;UBERON:0000468!5.38e-10!659;UBERON:0000914!9.42e-10!83;UBERON:0002329!9.42e-10!83;UBERON:0003077!9.42e-10!83;UBERON:0003059!9.42e-10!83;UBERON:0007282!9.42e-10!83;UBERON:0009618!9.42e-10!83;UBERON:0007285!9.42e-10!83;UBERON:0000483!9.69e-10!309;UBERON:0002100!4.60e-09!216;UBERON:0002199!2.16e-08!45;UBERON:0002416!2.16e-08!45;UBERON:0002097!2.65e-08!40;UBERON:0000486!2.92e-08!82;UBERON:0000467!5.66e-08!625;UBERON:0000480!8.24e-08!626;UBERON:0000477!8.89e-08!286;UBERON:0003104!1.19e-07!238;UBERON:0009142!1.19e-07!238;UBERON:0004290!2.41e-07!70;UBERON:0000490!9.28e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.90e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.26e-10,99;UBERON:0002097,1.37e-08,41;UBERON:0002199,2.29e-08,46;UBERON:0002416,2.29e-08,46;UBERON:0003104,1.89e-07,160;UBERON:0009142,1.89e-07,160;UBERON:0006554,3.16e-07,47;UBERON:0001008,6.38e-07,48 | |||
|phase1_expression=1.09007027562334,1.92690471501885,0.563817616383885,1.0007329835313,0,2.61701557230111,0,1.26343974685366,0.261185628199839,1.22866968250754,1.39560233594486,0.873765488520689,1.05506791291381,3.34169152992126,1.65698687863958,1.34465029290355,1.20538905604795,0,0.975865597581014,1.47745269692145,4.48801520737357,2.19418305034661,0.85870796139317,1.09499540058307,0.251085279189606,0,0,0,0,0,0,0,1.204823675113,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895037932904712,6.14446559053763,0.50133791063589,2.60723734129483,1.5905718941022,0.486634870302636,0.756278537312543,1.77383517970051,1.75669571386252,0.458426764241994,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.198762407366705,1.72046919021225,0,0,3.77549492588915,3.85165258716094,2.29894463190492,0.258416759169329,0.35576626268671,0,0.805658634218294,0.760272105718513,0.488124115096339,1.83831540172934,3.24056779152704,0.625098097988558,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,2.18047026071267,1.98788780678127,5.31848148991235,0.397227542439656,5.73673241497627,4.965357350777,1.68203280042692,0,4.9333509683432,0,0.538842688278752,0.653847612453835,0.454072282934794,0,2.81185718200556,0.936480230490962,1.1409436430889,1.49448680551801,1.996386476944,1.78060238804945,1.26405726032024,2.44985005505872,4.79053837515895,2.58314452939414,2.37600571456411,1.23633464639278,0,0,1.34668891163253,3.75355559615892,1.38532057742091,0.877955241761676,3.37136575378922,1.35214253015937,1.24775401476023,7.71375433462106,2.34913127700424,2.54318281391474,3.90118424909723,4.74041634496819,2.31876486041066,3.7223371266318,3.20675031258406,2.92311015483596,2.77677151668526,2.02509777013059,2.7479829659198,3.55009592516614,3.32481924151213,4.0694542154517,0.57978255948989,0.545492241181669,0.286804595389004,0.365921118388786,0,0.232387885739037,0.414644220061482,0.504641701751257,0,0,7.07565032012174,1.38134921352481,0.464367928031979,0,0.591534000199219,0.842923450390509,0.723033089650446,0.882351781859152,1.08939722046203,1.18635309555548,0.808987848960987,0.784885860501384,0,0,0,2.057870056657,0,0,0,0.590789906681404,0,0,2.57351715447788,0.98775256867763,1.1240175325762,0.402115889646523,2.03694579348765,2.28065813717227,0,4.3299402607582,2.08674728955138,0.70445216541493,0.721832238805369,0.925971025153221,0.380508304469197,0,0,0,0,0,0,2.51973192298289,0.992425680696705,1.88072897675981,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0.763976851116555,0,0,0.205654985406647,0.300343057843917,0.285826432630578,2.91540819297938,1.30788020649984,5.35369486492935,0.387815147273333,0,0,2.12750493267896,4.16029747645464,2.57207374262142,5.67396528093113,1.0656887160644,1.71573592389777,0.542621605391443,0.823240336780769,0.325736184293735,2.13235169245527,1.58390374586686,0.602878754119172,1.74306691720059,1.19967589418468,0,0,0,3.59437283237374,4.59447743336456,0,1.59259437334337,2.67119219315498,1.07436577943937,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.27587750330633,0,0,0,3.92612773501248,5.00170521059677,1.35632511849868,4.15941723061614,15.7017510141502,8.51593041183247,2.45996971484698,0.601892199455438,0,4.1389228517002,5.31380478828349,2.21243002250044,5.12613325361689,0.391602314925481,0.686286847621712,0,0,0,1.5156378572313,4.99306318531491,3.62868351995616,0.744323423456331,0.61384789315225,1.96462066103151,1.53766979106841,2.55853624533352,2.2519548960105,0,3.70103265126373,0.710246901252508,2.38168752440047,4.15403543346897,2.5566283261191,0,2.40607764363942,0.368323955743585,3.21480454860899,5.82691737621495,3.67148361886388,2.70719767744447,2.46449078734127,1.56869953835371,4.38417673959782,1.68882606228601,0,1.87103075804167,1.51141141271498,0,1.89662506280697,2.00675909541941,3.56826782263054,0.831076008928724,2.46262230194396,0,0,1.28225062558195,1.31205858279882,2.27764876265012,0.309123034943167,0.824125183365091,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,3.0934629853479,0.770243085573222,0.614014698904518,0.413509717453592,0.107420244868274,1.0151168573996,1.10794615640931,0.801288320820636,0.826424576804891,0.384380134730212,0.382838137483752,0.10115778085555,2.32422774648643,5.35180989612088,1.3940745403212,0.308033580176089,0,0,0.9266210955196,0.572499546967965,0.372158369359667,0.316379424718726,0.38126038784765,2.55897791311334,0,0.95460974377781,1.56989728039846,0.359744915166629,2.47083326762449,0.235624804691373,0.808729926293264,0,0,1.95053495635836,1.46228093778771,5.28250733783777,2.59349831675173,1.55545975149084,1.13008116620243,0.551365343546124,1.99031692572366,1.75380354101505,0.578775534266688,1.31178950409327,0.202910376962704,3.40805847909725,1.69017361519345,2.72481569187698,1.27723753317057,0.35667105148125,1.41904425628239,3.16661452946496,2.63435914367922,2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| ||
|short_description=p5@AXL | |short_description=p5@AXL | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p5@AXL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AXL_5end |
Coexpression cluster: | C2490_Olfactory_mesothelioma_Hair_leiomyoma_mesenchymal_papillary_tenocyte |
Association with transcript: | -380bp_to_X66029_5end |
EntrezGene: | AXL |
HGNC: | 905 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.99e-23 | 76 |
skin fibroblast | 4.36e-14 | 23 |
mesothelial cell | 9.52e-10 | 19 |
mesodermal cell | 2.25e-09 | 121 |
kidney cell | 1.91e-07 | 17 |
kidney epithelial cell | 1.91e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.26e-10 | 99 |
skin of body | 1.37e-08 | 41 |
integument | 2.29e-08 | 46 |
integumental system | 2.29e-08 | 46 |
mesenchyme | 1.89e-07 | 160 |
entire embryonic mesenchyme | 1.89e-07 | 160 |
urinary system structure | 3.16e-07 | 47 |
renal system | 6.38e-07 | 48 |