FFCP PHASE1:Hg19::chr1:161208013..161208038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9970 | |EntrezGene=9970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7969 | |HGNC=7969 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8R7 | |UniProt=B7Z8R7 | ||
|association_with_transcript=0bp_to_ENST00000515452_5end | |association_with_transcript=0bp_to_ENST00000515452_5end | ||
|cluster_id=chr1:161208013..161208038,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_NR1I3_5end | |description=CAGE_peak_1_at_NR1I3_5end | ||
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|ontology_enrichment_celltype=CL:0000181!4.28e-09!12;CL:0000417!4.28e-09!12;CL:0000668!4.28e-09!12;CL:0000414!4.28e-09!12;CL:0000412!4.28e-09!12;CL:0000182!4.28e-09!12 | |ontology_enrichment_celltype=CL:0000181!4.28e-09!12;CL:0000417!4.28e-09!12;CL:0000668!4.28e-09!12;CL:0000414!4.28e-09!12;CL:0000412!4.28e-09!12;CL:0000182!4.28e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.00e-13;12 | |ontology_enrichment_celltype_v019=CL:0000182;3.00e-13;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.00e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.86e-09;2!UBERON:0004161;5.31e-07;11 | |ontology_enrichment_development_v019=UBERON:0010122;1.86e-09;2!UBERON:0004161;5.31e-07;11 | ||
|ontology_enrichment_disease=DOID:178!1.26e-07!1;DOID:326!1.26e-07!1;DOID:3978!1.26e-07!1;DOID:3394!1.26e-07!1;DOID:5844!1.26e-07!1 | |ontology_enrichment_disease=DOID:178!1.26e-07!1;DOID:326!1.26e-07!1;DOID:3978!1.26e-07!1;DOID:3394!1.26e-07!1;DOID:5844!1.26e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002108;7.02e-30;4!UBERON:0002107;4.58e-22;19!UBERON:0006925;4.58e-22;19!UBERON:0002423;8.36e-17;25!UBERON:0002365;1.51e-13;31!UBERON:0002330;1.51e-13;31!UBERON:0002368;9.56e-12;33!UBERON:0001873;1.86e-09;2!UBERON:0000160;8.76e-09;17!UBERON:0000949;1.32e-08;43!UBERON:0001007;8.34e-08;81!UBERON:0005409;5.42e-07;22!UBERON:0002114;8.62e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002108;7.02e-30;4!UBERON:0002107;4.58e-22;19!UBERON:0006925;4.58e-22;19!UBERON:0002423;8.36e-17;25!UBERON:0002365;1.51e-13;31!UBERON:0002330;1.51e-13;31!UBERON:0002368;9.56e-12;33!UBERON:0001873;1.86e-09;2!UBERON:0000160;8.76e-09;17!UBERON:0000949;1.32e-08;43!UBERON:0001007;8.34e-08;81!UBERON:0005409;5.42e-07;22!UBERON:0002114;8.62e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,7.02e-30,4;UBERON:0002107,4.58e-22,19;UBERON:0006925,4.58e-22,19;UBERON:0008836,4.58e-22,19;UBERON:0008835,4.45e-19,22;UBERON:0003894,4.45e-19,22;UBERON:0009854,2.96e-18,23;UBERON:0007499,8.36e-17,25;UBERON:0009497,8.36e-17,25;UBERON:0000015,8.36e-17,25;UBERON:0002423,8.36e-17,25;UBERON:0006235,8.36e-17,25;UBERON:0004161,8.36e-17,25;UBERON:0009856,3.66e-16,26;UBERON:0002365,1.43e-13,31;UBERON:0002330,1.43e-13,31;UBERON:0002368,5.01e-12,35;UBERON:0001873,1.86e-09,2;UBERON:0010122,1.86e-09,2;UBERON:0000949,2.33e-09,45;UBERON:0000160,8.76e-09,17;UBERON:0004921,2.39e-08,118;UBERON:0003929,8.49e-08,54;UBERON:0005172,8.49e-08,54;UBERON:0005173,8.49e-08,54;UBERON:0002530,3.92e-07,59;UBERON:0002417,5.16e-07,60;UBERON:0000916,5.16e-07,60;UBERON:0002114,8.62e-07,2 | |||
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|short_description=p1@NR1I3 | |short_description=p1@NR1I3 | ||
}} | }} |
Latest revision as of 05:41, 18 September 2015
Short description: | p1@NR1I3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR1I3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000515452_5end |
EntrezGene: | NR1I3 |
HGNC: | 7969 |
UniProt: | B7Z8R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.00e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 7.02e-30 | 4 |
liver | 4.58e-22 | 19 |
digestive gland | 4.58e-22 | 19 |
liver bud | 4.58e-22 | 19 |
hepatic diverticulum | 4.45e-19 | 22 |
liver primordium | 4.45e-19 | 22 |
digestive tract diverticulum | 2.96e-18 | 23 |
epithelial sac | 8.36e-17 | 25 |
epithelium of foregut-midgut junction | 8.36e-17 | 25 |
anatomical boundary | 8.36e-17 | 25 |
hepatobiliary system | 8.36e-17 | 25 |
foregut-midgut junction | 8.36e-17 | 25 |
septum transversum | 8.36e-17 | 25 |
sac | 3.66e-16 | 26 |
exocrine gland | 1.43e-13 | 31 |
exocrine system | 1.43e-13 | 31 |
endocrine gland | 5.01e-12 | 35 |
caudate nucleus | 1.86e-09 | 2 |
future caudate nucleus | 1.86e-09 | 2 |
endocrine system | 2.33e-09 | 45 |
intestine | 8.76e-09 | 17 |
subdivision of digestive tract | 2.39e-08 | 118 |
gut epithelium | 8.49e-08 | 54 |
abdomen element | 8.49e-08 | 54 |
abdominal segment element | 8.49e-08 | 54 |
gland | 3.92e-07 | 59 |
abdominal segment of trunk | 5.16e-07 | 60 |
abdomen | 5.16e-07 | 60 |
duodenum | 8.62e-07 | 2 |