FFCP PHASE1:Hg19::chr16:85722530..85722615,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51659 | |EntrezGene=51659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24575 | |HGNC=24575 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y248 | |UniProt=Q9Y248 | ||
|association_with_transcript=0bp_to_ENST00000253462,NM_016095,uc002fja.2,uc002fjb.2_5end | |association_with_transcript=0bp_to_ENST00000253462,NM_016095,uc002fja.2,uc002fjb.2_5end | ||
|cluster_id=chr16:85722530..85722615,- | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_1_at_GINS2_5end | |description=CAGE_peak_1_at_GINS2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000066!5.57e-21!254;CL:0000012!1.80e-14!682;CL:0000548!3.13e-14!679;CL:0000004!3.13e-14!679;CL:0000255!3.13e-14!679;CL:0002321!8.29e-13!248;CL:0000220!3.48e-12!246;CL:0000003!5.34e-08!722;CL:0000055!2.24e-07!180;CL:0002319!4.20e-07!25;CL:0000333!6.57e-07!41;CL:0000133!8.03e-07!59 | |ontology_enrichment_celltype=CL:0000066!5.57e-21!254;CL:0000012!1.80e-14!682;CL:0000548!3.13e-14!679;CL:0000004!3.13e-14!679;CL:0000255!3.13e-14!679;CL:0002321!8.29e-13!248;CL:0000220!3.48e-12!246;CL:0000003!5.34e-08!722;CL:0000055!2.24e-07!180;CL:0002319!4.20e-07!25;CL:0000333!6.57e-07!41;CL:0000133!8.03e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.12e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;4.12e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.35e-21,253;CL:0002321,1.78e-12,250;CL:0002319,3.71e-07,25;CL:0000333,7.56e-07,41;CL:0000133,8.27e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.07e-40!235;DOID:14566!1.90e-39!239;DOID:0050687!6.18e-21!143;DOID:0050686!3.41e-20!137;DOID:305!8.06e-18!106;DOID:2531!6.02e-16!51;DOID:0060083!6.02e-16!51;DOID:1240!1.53e-12!39;DOID:8692!1.32e-09!31 | |ontology_enrichment_disease=DOID:162!1.07e-40!235;DOID:14566!1.90e-39!239;DOID:0050687!6.18e-21!143;DOID:0050686!3.41e-20!137;DOID:305!8.06e-18!106;DOID:2531!6.02e-16!51;DOID:0060083!6.02e-16!51;DOID:1240!1.53e-12!39;DOID:8692!1.32e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;2.83e-10;39!DOID:2531;2.97e-10;51!DOID:0060083;2.97e-10;51!DOID:8692;1.96e-09;31 | |ontology_enrichment_disease_v019=DOID:1240;2.83e-10;39!DOID:2531;2.97e-10;51!DOID:0060083;2.97e-10;51!DOID:8692;1.96e-09;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,8.43e-41,235;DOID:14566,1.52e-39,239;DOID:0050687,8.58e-21,143;DOID:0050686,3.11e-20,137;DOID:305,7.15e-18,106;DOID:2531,4.36e-16,51;DOID:0060083,4.36e-16,51;DOID:1240,1.20e-12,39;DOID:8692,1.10e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000072!9.48e-08!46;UBERON:0001737!3.21e-07!9 | |ontology_enrichment_uberon=UBERON:0000072!9.48e-08!46;UBERON:0001737!3.21e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.79e-07;9!UBERON:0001557;2.79e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.79e-07;9!UBERON:0001557;2.79e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.83e-07,9;UBERON:0000072,3.97e-07,47 | |||
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| ||
|short_description=p1@GINS2 | |short_description=p1@GINS2 | ||
}} | }} |
Latest revision as of 05:43, 18 September 2015
Short description: | p1@GINS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GINS2_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000253462, NM_016095, uc002fja.2, uc002fjb.2_5end |
EntrezGene: | GINS2 |
HGNC: | 24575 |
UniProt: | Q9Y248 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.35e-21 | 253 |
embryonic cell | 1.78e-12 | 250 |
neural cell | 3.71e-07 | 25 |
migratory neural crest cell | 7.56e-07 | 41 |
neurectodermal cell | 8.27e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.83e-07 | 9 |
segment of respiratory tract | 3.97e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 8.43e-41 | 235 |
disease of cellular proliferation | 1.52e-39 | 239 |
cell type cancer | 8.58e-21 | 143 |
organ system cancer | 3.11e-20 | 137 |
carcinoma | 7.15e-18 | 106 |
hematologic cancer | 4.36e-16 | 51 |
immune system cancer | 4.36e-16 | 51 |
leukemia | 1.20e-12 | 39 |
myeloid leukemia | 1.10e-09 | 31 |