FFCP PHASE1:Hg19::chr1:44889667..44889688,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55182 | |EntrezGene=55182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25552 | |HGNC=25552 | ||
|TSSclassifier=strong | |||
|UniProt=B4DLZ9 | |UniProt=B4DLZ9 | ||
|association_with_transcript=-23bp_to_ENST00000443020_5end | |association_with_transcript=-23bp_to_ENST00000443020_5end | ||
|cluster_id=chr1:44889667..44889688,+ | |||
|description=CAGE_peak_12_at_RNF220_5end | |description=CAGE_peak_12_at_RNF220_5end | ||
|id=chr1:44889667..44889688,+ | |id=chr1:44889667..44889688,+ | ||
|ontology_enrichment_celltype=CL:0002623!8.19e-09!3;CL:0002605!1.58e-08!3 | |ontology_enrichment_celltype=CL:0002623!8.19e-09!3;CL:0002605!1.58e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.88e-14;3!CL:0002605;1.20e-13;3!CL:0000037;1.05e-10;1!CL:0001024;1.05e-10;1!CL:0000243;4.23e-09;15!CL:0000125;4.23e-09;15!CL:0000622;7.72e-09;5!CL:0000095;3.69e-08;17!CL:0000154;1.67e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.64e-14,3;CL:0002605,1.60e-13,3;CL:0001024,1.33e-10,1;CL:0000243,4.19e-09,15;CL:0000125,4.19e-09,15;CL:0000030,4.19e-09,15;CL:0000339,4.19e-09,15;CL:0000622,7.43e-09,5;CL:0000095,3.66e-08,17;CL:0000123,3.66e-08,17;CL:0000154,1.62e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000339;4.23e-09;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:8692;2.83e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.67e-07,31 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002702;1.16e-19;2!UBERON:0000200;1.27e-14;6!UBERON:0001870;1.93e-13;3!UBERON:0000956;1.32e-12;25!UBERON:0000203;1.32e-12;25!UBERON:0007195;3.40e-11;1!UBERON:0002581;1.05e-10;1!UBERON:0001869;1.48e-10;32!UBERON:0002791;6.26e-10;32!UBERON:0003528;5.53e-09;34!UBERON:0002020;5.53e-09;34!UBERON:0001893;5.53e-09;34!UBERON:0001872;2.00e-08;5!UBERON:0001044;1.67e-07;6!UBERON:0003293;1.67e-07;6!UBERON:0003294;1.67e-07;6!UBERON:0010047;1.67e-07;6!UBERON:0003408;1.67e-07;6!UBERON:0000167;1.67e-07;6!UBERON:0001950;2.43e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,5.94e-20,2;UBERON:0000200,9.37e-15,6;UBERON:0001870,1.24e-13,3;UBERON:0000956,1.31e-12,25;UBERON:0000203,1.31e-12,25;UBERON:0007195,3.76e-11,1;UBERON:0002581,1.10e-10,1;UBERON:0002791,7.57e-10,32;UBERON:0001869,7.57e-10,32;UBERON:0003528,2.92e-09,34;UBERON:0002020,2.92e-09,34;UBERON:0001893,2.92e-09,34;UBERON:0001872,2.16e-08,5;UBERON:0002780,1.21e-07,41;UBERON:0001890,1.21e-07,41;UBERON:0003080,1.21e-07,41;UBERON:0006240,1.21e-07,41;UBERON:0000955,1.25e-07,68;UBERON:0006238,1.25e-07,68;UBERON:0001044,1.62e-07,6;UBERON:0003293,1.62e-07,6;UBERON:0003294,1.62e-07,6;UBERON:0010047,1.62e-07,6;UBERON:0000167,1.62e-07,6;UBERON:0001950,2.23e-07,20;UBERON:0002619,9.53e-07,22 | |||
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| ||
|short_description=p12@RNF220 | |short_description=p12@RNF220 | ||
}} | }} |
Latest revision as of 06:13, 18 September 2015
Short description: | p12@RNF220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_RNF220_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000443020_5end |
EntrezGene: | RNF220 |
HGNC: | 25552 |
UniProt: | B4DLZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.64e-14 | 3 |
astrocyte of the cerebral cortex | 1.60e-13 | 3 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.33e-10 | 1 |
glial cell (sensu Vertebrata) | 4.19e-09 | 15 |
glial cell | 4.19e-09 | 15 |
glioblast | 4.19e-09 | 15 |
glioblast (sensu Vertebrata) | 4.19e-09 | 15 |
acinar cell | 7.43e-09 | 5 |
neuron associated cell | 3.66e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.66e-08 | 17 |
protein secreting cell | 1.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 5.94e-20 | 2 |
gyrus | 9.37e-15 | 6 |
frontal cortex | 1.24e-13 | 3 |
cerebral cortex | 1.31e-12 | 25 |
pallium | 1.31e-12 | 25 |
stroma of bone marrow | 3.76e-11 | 1 |
postcentral gyrus | 1.10e-10 | 1 |
regional part of telencephalon | 7.57e-10 | 32 |
cerebral hemisphere | 7.57e-10 | 32 |
brain grey matter | 2.92e-09 | 34 |
gray matter | 2.92e-09 | 34 |
telencephalon | 2.92e-09 | 34 |
parietal lobe | 2.16e-08 | 5 |
regional part of forebrain | 1.21e-07 | 41 |
forebrain | 1.21e-07 | 41 |
anterior neural tube | 1.21e-07 | 41 |
future forebrain | 1.21e-07 | 41 |
brain | 1.25e-07 | 68 |
future brain | 1.25e-07 | 68 |
saliva-secreting gland | 1.62e-07 | 6 |
gland of oral region | 1.62e-07 | 6 |
gland of foregut | 1.62e-07 | 6 |
oral gland | 1.62e-07 | 6 |
oral cavity | 1.62e-07 | 6 |
neocortex | 2.23e-07 | 20 |
regional part of cerebral cortex | 9.53e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.67e-07 | 31 |