FFCP PHASE1:Hg19::chr9:95298946..95298962,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1842 | |EntrezGene=1842 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3154 | |HGNC=3154 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T9F4 | |UniProt=Q5T9F4 | ||
|association_with_transcript=-9bp_to_ENST00000395534_5end | |association_with_transcript=-9bp_to_ENST00000395534_5end | ||
|cluster_id=chr9:95298946..95298962,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_6_at_ECM2_5end | |description=CAGE_peak_6_at_ECM2_5end | ||
|id=chr9:95298946..95298962,- | |id=chr9:95298946..95298962,- | ||
|ontology_enrichment_celltype=CL:0000136!1.31e-10!15 | |ontology_enrichment_celltype=CL:0000136!1.31e-10!15 | ||
|ontology_enrichment_celltype_v019=CL:0000136;1.09e-14;13!CL:0000511;7.18e-07;1!CL:0002625;7.18e-07;1!CL:0000216;7.18e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.38e-12,15;CL:0000511,7.19e-07,1;CL:0002625,7.19e-07,1;CL:0000216,7.19e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.00e-11;2!UBERON:0006603;1.65e-08;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-37!115;UBERON:0005904!3.32e-07!4;UBERON:0001049!4.45e-07!57;UBERON:0005068!4.45e-07!57;UBERON:0006241!4.45e-07!57;UBERON:0007135!4.45e-07!57 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-37!115;UBERON:0005904!3.32e-07!4;UBERON:0001049!4.45e-07!57;UBERON:0005068!4.45e-07!57;UBERON:0006241!4.45e-07!57;UBERON:0007135!4.45e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.80e-21;4!UBERON:0006947;3.95e-16;3!UBERON:0004054;3.95e-16;3!UBERON:0003135;7.86e-12;11!UBERON:0002081;2.00e-11;2!UBERON:0002133;3.77e-11;2!UBERON:0000058;1.34e-08;10!UBERON:0003101;4.09e-08;22!UBERON:0000079;4.09e-08;22!UBERON:0004151;6.71e-08;3!UBERON:0003978;1.02e-07;3!UBERON:0000946;1.02e-07;3!UBERON:0002107;4.51e-07;19!UBERON:0006925;4.51e-07;19!UBERON:0001136;7.18e-07;1!UBERON:0001343;7.18e-07;1!UBERON:0004910;7.18e-07;1!UBERON:0004813;7.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.65e-21,4;UBERON:0006947,2.34e-16,3;UBERON:0004054,2.34e-16,3;UBERON:0003135,5.95e-12,11;UBERON:0002081,2.11e-11,2;UBERON:0010227,2.11e-11,2;UBERON:0002133,3.58e-11,2;UBERON:0007023,6.97e-11,114;UBERON:0003101,3.35e-08,22;UBERON:0000079,3.35e-08,22;UBERON:0004151,6.96e-08,3;UBERON:0003978,9.85e-08,3;UBERON:0009751,9.85e-08,3;UBERON:0000946,9.85e-08,3;UBERON:0002523,9.85e-08,3;UBERON:0005983,9.85e-08,3;UBERON:0002165,9.85e-08,3;UBERON:0002062,9.85e-08,3;UBERON:0007280,9.85e-08,3;UBERON:0002107,4.20e-07,19;UBERON:0006925,4.20e-07,19;UBERON:0008836,4.20e-07,19;UBERON:0001136,7.19e-07,1;UBERON:0001343,7.19e-07,1;UBERON:0004910,7.19e-07,1;UBERON:0005154,7.19e-07,1;UBERON:0005295,7.19e-07,1;UBERON:0004813,7.19e-07,1;UBERON:0005297,7.19e-07,1;UBERON:0005294,7.19e-07,1;UBERON:0010141,7.19e-07,1;UBERON:0005891,7.19e-07,1 | |||
|phase1_expression=0.54503513781167,1.07050261945492,0.704772020479856,0,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,3.9313088667105,12.4065880403095,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,0.768834895534206,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4375522928972,0,0,0,0,4.82051789532479,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,9.41438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.995213339381022,0,0,0,0,2.00070672109872,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,1.97292201424695,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,1.39641200636127,0.916641696046735,1.43574604915363,0.399358000997982,0.429226048136571,0,0.806201669840715,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0.945668487590378,0.262272940674991,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,6.30174604815755,2.65013777824443,0.129282956361551,0,0,0,1.60181118851542,6.13096789888697,0.414239055347196,0.496166021811951,0,0,0,9.24830265728106,11.7824250190669,15.3172788381731,22.6232115189765,0,0,0,0,0,0.887432412294818,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,1.19349733269765,3.76051641746286,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.126831620387814,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0.685952037749674,0.135939465953663,0.0657727735628491,0,0,2.43328587836593,0.157115589916002,0.560544326627578,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,0,0.410651227424988,2.3196288626764,1.45713297917742,0,0,0,0,0,0,0.617393264863557,0,0,1.22574160876953,0,0.981542335574726,0.297046400327086,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0.436350690340377,0,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,2.42491834298366,0.535928260312357,0,0.103432995861895,0.426467963801962,0.476128862927481,0,0.31037357147929,0,0.25458863311266,0.404234377916439,0.435433495793923,0,0.134704106029175,0.573777643141411,1.66330178273007,0,0,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0.665756774185513,1.00636896795513,0 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|phase1_expression=0.54503513781167,1.07050261945492,0.704772020479856,0,1.34088328328186,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0.486634870302636,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,3.9313088667105,12.4065880403095,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,0.768834895534206,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4375522928972,0,0,0,0,4.82051789532479,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,9.41438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0.995213339381022,0,0,0,0,2.00070672109872,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06149077404007,0.611030144933625,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,1.97292201424695,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.581934098930517,0,0.90392296312213,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,1.39641200636127,0.916641696046735,1.43574604915363,0.399358000997982,0.429226048136571,0,0.806201669840715,0,0,0,0,0,0,0,0,0.681017030557878,0,0,0,0,0,0,0,0.945668487590378,0.262272940674991,0,0,0,2.1440859791201,0.662091970365432,0,0,0,0,0,0,0,0,6.30174604815755,2.65013777824443,0.129282956361551,0,0,0,1.60181118851542,6.13096789888697,0.414239055347196,0.496166021811951,0,0,0,9.24830265728106,11.7824250190669,15.3172788381731,22.6232115189765,0,0,0,0,0,0.887432412294818,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.247871528518004,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0.319267718114302,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,1.19349733269765,3.76051641746286,0,0,0,0,0,0.202612753855184,0,0.620060389503552,0.126831620387814,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0.685952037749674,0.135939465953663,0.0657727735628491,0,0,2.43328587836593,0.157115589916002,0.560544326627578,0,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0,0,0.430227358820278,0,0,1.69354820076372,0,0,0,0,0,0,0,0.410651227424988,2.3196288626764,1.45713297917742,0,0,0,0,0,0,0.617393264863557,0,0,1.22574160876953,0,0.981542335574726,0.297046400327086,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0.436350690340377,0,0,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,2.42491834298366,0.535928260312357,0,0.103432995861895,0.426467963801962,0.476128862927481,0,0.31037357147929,0,0.25458863311266,0.404234377916439,0.435433495793923,0,0.134704106029175,0.573777643141411,1.66330178273007,0,0,0,0,2.34640942403454,1.4668973301944,0.406896178315738,0.665756774185513,1.00636896795513,0 | ||
|short_description=p6@ECM2 | |short_description=p6@ECM2 | ||
}} | }} |
Latest revision as of 07:32, 18 September 2015
Short description: | p6@ECM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ECM2_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -9bp_to_ENST00000395534_5end |
EntrezGene: | ECM2 |
HGNC: | 3154 |
UniProt: | Q5T9F4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.38e-12 | 15 |
androgen binding protein secreting cell | 7.19e-07 | 1 |
seminiferous tubule epithelial cell | 7.19e-07 | 1 |
Sertoli cell | 7.19e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.65e-21 | 4 |
male genital duct | 2.34e-16 | 3 |
internal male genitalia | 2.34e-16 | 3 |
male reproductive organ | 5.95e-12 | 11 |
cardiac atrium | 2.11e-11 | 2 |
future cardiac atrium | 2.11e-11 | 2 |
atrioventricular valve | 3.58e-11 | 2 |
adult organism | 6.97e-11 | 114 |
male organism | 3.35e-08 | 22 |
male reproductive system | 3.35e-08 | 22 |
cardiac chamber | 6.96e-08 | 3 |
valve | 9.85e-08 | 3 |
cardiac mesenchyme | 9.85e-08 | 3 |
cardial valve | 9.85e-08 | 3 |
tunica intima | 9.85e-08 | 3 |
heart layer | 9.85e-08 | 3 |
endocardium | 9.85e-08 | 3 |
endocardial cushion | 9.85e-08 | 3 |
presumptive endocardium | 9.85e-08 | 3 |
liver | 4.20e-07 | 19 |
digestive gland | 4.20e-07 | 19 |
liver bud | 4.20e-07 | 19 |
mesothelium | 7.19e-07 | 1 |
seminiferous tubule of testis | 7.19e-07 | 1 |
epithelium of male gonad | 7.19e-07 | 1 |
epithelial cord | 7.19e-07 | 1 |
sex cord | 7.19e-07 | 1 |
seminiferous tubule epithelium | 7.19e-07 | 1 |
testis sex cord | 7.19e-07 | 1 |
genital ridge | 7.19e-07 | 1 |
primitive sex cord of indifferent gonad | 7.19e-07 | 1 |
coelomic epithelium | 7.19e-07 | 1 |