FFCP PHASE1:Hg19::chr11:5247918..5247954,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3043 | |EntrezGene=3043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4827 | |HGNC=4827 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=98bp_to_ENST00000475226_5end | |association_with_transcript=98bp_to_ENST00000475226_5end | ||
|cluster_id=chr11:5247918..5247954,- | |||
|coexpression_cluster_id=C478 | |coexpression_cluster_id=C478 | ||
|description=CAGE_peak_5_at_HBB_5end | |description=CAGE_peak_5_at_HBB_5end | ||
|id=chr11:5247918..5247954,- | |id=chr11:5247918..5247954,- | ||
|ontology_enrichment_celltype=CL:0002057!2.42e-11!42;CL:0000860!2.78e-10!45;CL:0000766!2.43e-07!76 | |ontology_enrichment_celltype=CL:0002057!2.42e-11!42;CL:0000860!2.78e-10!45;CL:0000766!2.43e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.20e-18;2!CL:0000558;1.20e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.20e-18,2;CL:0000765,1.20e-18,2;CL:0000050,1.20e-18,2;CL:0000038,1.20e-18,2;CL:0000558,1.20e-18,2;CL:0000547,1.20e-18,2;CL:0000549,1.20e-18,2;CL:0000550,1.20e-18,2;CL:0000552,1.20e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;8.99e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.48e-40!115;UBERON:0000178!1.53e-17!15;UBERON:0000179!1.53e-17!15;UBERON:0000463!1.53e-17!15;UBERON:0002390!1.28e-12!102;UBERON:0003061!1.28e-12!102;UBERON:0002193!9.87e-12!112 | |ontology_enrichment_uberon=UBERON:0007023!4.48e-40!115;UBERON:0000178!1.53e-17!15;UBERON:0000179!1.53e-17!15;UBERON:0000463!1.53e-17!15;UBERON:0002390!1.28e-12!102;UBERON:0003061!1.28e-12!102;UBERON:0002193!9.87e-12!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.50e-47;15!UBERON:0000179;6.50e-47;15!UBERON:0000463;6.50e-47;15!UBERON:0002390;1.47e-19;32!UBERON:0002193;6.41e-11;42!UBERON:0002084;8.99e-10;1!UBERON:0002135;8.99e-10;1!UBERON:0002171;8.99e-10;1!UBERON:0002082;8.99e-10;1!UBERON:0006518;8.99e-10;1!UBERON:0008949;8.99e-10;1!UBERON:0000101;8.99e-10;1!UBERON:0002167;8.99e-10;1!UBERON:0007023;6.01e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.50e-47,15;UBERON:0000179,6.50e-47,15;UBERON:0000463,6.50e-47,15;UBERON:0007023,7.66e-22,114;UBERON:0002135,7.55e-10,1;UBERON:0002084,8.99e-10,1;UBERON:0002082,8.99e-10,1;UBERON:0010226,8.99e-10,1;UBERON:0002171,9.82e-10,1;UBERON:0006518,9.82e-10,1;UBERON:0008949,9.82e-10,1;UBERON:0000101,9.82e-10,1;UBERON:0002167,9.82e-10,1;UBERON:0002390,5.14e-09,98;UBERON:0003061,5.14e-09,98;UBERON:0004535,4.88e-08,109;UBERON:0002193,5.04e-08,108;UBERON:0001009,8.94e-08,112 | |||
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| ||
|short_description=p5@HBB | |short_description=p5@HBB | ||
}} | }} |
Latest revision as of 07:35, 18 September 2015
Short description: | p5@HBB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HBB_5end |
Coexpression cluster: | C478_blood_Whole_Reticulocytes_liver_skeletal_lung_Neutrophils |
Association with transcript: | 98bp_to_ENST00000475226_5end |
EntrezGene: | HBB |
HGNC: | 4827 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.20e-18 | 2 |
erythroblast | 1.20e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.20e-18 | 2 |
erythroid progenitor cell | 1.20e-18 | 2 |
reticulocyte | 1.20e-18 | 2 |
proerythroblast | 1.20e-18 | 2 |
basophilic erythroblast | 1.20e-18 | 2 |
polychromatophilic erythroblast | 1.20e-18 | 2 |
orthochromatic erythroblast | 1.20e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 6.50e-47 | 15 |
haemolymphatic fluid | 6.50e-47 | 15 |
organism substance | 6.50e-47 | 15 |
adult organism | 7.66e-22 | 114 |
mitral valve | 7.55e-10 | 1 |
heart left ventricle | 8.99e-10 | 1 |
cardiac ventricle | 8.99e-10 | 1 |
future cardiac ventricle | 8.99e-10 | 1 |
lower lobe of right lung | 9.82e-10 | 1 |
right lung lobe | 9.82e-10 | 1 |
lower lobe of lung | 9.82e-10 | 1 |
lobe of lung | 9.82e-10 | 1 |
right lung | 9.82e-10 | 1 |
hematopoietic system | 5.14e-09 | 98 |
blood island | 5.14e-09 | 98 |
cardiovascular system | 4.88e-08 | 109 |
hemolymphoid system | 5.04e-08 | 108 |
circulatory system | 8.94e-08 | 112 |