FFCP PHASE1:Hg19::chr4:69313145..69313164,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:69313145..69313164,+ to FFCP PHASE1:Hg19::chr4:69313145..69313164,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28983 | |EntrezGene=28983 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24465 | |HGNC=24465 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UL52 | |UniProt=Q9UL52 | ||
|association_with_transcript=-2bp_to_ENST00000305363,NM_014058,uc003hdz.3_5end | |||
|cluster_id=chr4:69313145..69313164,+ | |||
|coexpression_cluster_id=C629 | |||
|description=CAGE_peak_2_at_TMPRSS11E_5end | |||
|id=chr4:69313145..69313164,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.01e-18!43;CL:0000223!5.29e-13!59;CL:0002251!1.21e-12!21;CL:0000066!5.49e-10!254;CL:0000244!4.82e-08!4;CL:0000731!4.82e-08!4;CL:0002368!7.02e-08!13;CL:0002621!6.64e-07!3;CL:0002166!6.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002166;2.23e-13;3!CL:0002537;3.66e-09;5!CL:0002251;2.31e-07;20!CL:0002076;2.33e-07;42!CL:0002621;5.66e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.68e-13,3;CL:0002537,3.71e-09,5;CL:0002076,2.29e-08,42;CL:0002251,2.50e-07,20;CL:0002621,5.66e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!5.01e-15!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;7.77e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.39e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000161!5.47e-22!35;UBERON:0000166!2.41e-21!21;UBERON:0000165!9.23e-17!28;UBERON:0000930!9.23e-17!28;UBERON:0001004!1.80e-14!72;UBERON:0001044!1.19e-11!6;UBERON:0003293!1.19e-11!6;UBERON:0003294!1.19e-11!6;UBERON:0010047!1.19e-11!6;UBERON:0000167!1.19e-11!6;UBERON:0004119!1.50e-11!169;UBERON:0000925!1.50e-11!169;UBERON:0006595!1.50e-11!169;UBERON:0000974!7.14e-11!10;UBERON:0003408!8.94e-11!10;UBERON:0003729!5.69e-10!5;UBERON:0000078!2.01e-09!18;UBERON:0003102!3.28e-09!95;UBERON:0001444!7.75e-09!48;UBERON:0003343!1.52e-08!4;UBERON:0004785!1.52e-08!4;UBERON:0005631!8.94e-08!14;UBERON:0000158!8.94e-08!14;UBERON:0003101!1.08e-07!22;UBERON:0000079!1.08e-07!22;UBERON:0006562!1.63e-07!11;UBERON:0000305!1.91e-07!7;UBERON:0000344!2.68e-07!12;UBERON:0003135!4.08e-07!11;UBERON:0001723!4.47e-07!3;UBERON:0001033!4.47e-07!3;UBERON:0010056!4.47e-07!3;UBERON:0001949!6.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000161;1.95e-21;19!UBERON:0000166;1.95e-21;19!UBERON:0000165;1.90e-20;28!UBERON:0001044;7.41e-18;6!UBERON:0003293;7.41e-18;6!UBERON:0003294;7.41e-18;6!UBERON:0010047;7.41e-18;6!UBERON:0003408;7.41e-18;6!UBERON:0000167;7.41e-18;6!UBERON:0005631;3.80e-11;10!UBERON:0000158;3.80e-11;10!UBERON:0001041;8.73e-11;14!UBERON:0000305;9.22e-11;7!UBERON:0001708;3.70e-10;4!UBERON:0008895;3.70e-10;4!UBERON:0001829;1.17e-09;2!UBERON:0011159;3.23e-08;5!UBERON:0000974;1.82e-07;6!UBERON:0001723;3.45e-07;3!UBERON:0001033;3.45e-07;3!UBERON:0001949;5.66e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,1.53e-27,36;UBERON:0000166,1.02e-26,22;UBERON:0000165,1.21e-19,29;UBERON:0000930,1.21e-19,29;UBERON:0001044,7.84e-18,6;UBERON:0003293,7.84e-18,6;UBERON:0003294,7.84e-18,6;UBERON:0010047,7.84e-18,6;UBERON:0000167,7.84e-18,6;UBERON:0000153,1.18e-14,62;UBERON:0007811,1.18e-14,62;UBERON:0003102,1.52e-14,99;UBERON:0000033,2.34e-14,56;UBERON:0001004,3.43e-13,74;UBERON:0000305,1.10e-10,7;UBERON:0003408,1.31e-10,10;UBERON:0001444,1.36e-10,49;UBERON:0001708,3.00e-10,4;UBERON:0008895,3.00e-10,4;UBERON:0004119,4.96e-10,160;UBERON:0000925,4.96e-10,160;UBERON:0006595,4.96e-10,160;UBERON:0001829,9.39e-10,2;UBERON:0004871,2.35e-09,8;UBERON:0001007,2.47e-08,145;UBERON:0001555,2.47e-08,145;UBERON:0007026,2.47e-08,145;UBERON:0011159,2.74e-08,5;UBERON:0005631,7.42e-08,14;UBERON:0000158,7.42e-08,14;UBERON:0001723,3.40e-07,3;UBERON:0001033,3.40e-07,3;UBERON:0010056,3.40e-07,3;UBERON:0010188,5.61e-07,6;UBERON:0002539,5.61e-07,6;UBERON:0008816,5.61e-07,6;UBERON:0001949,5.66e-07,3;UBERON:0004921,9.75e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41130388857231,3.27295344709002,0.860413786167011,0.365921118388786,0.132529768321485,0.232387885739037,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0.439001141634502,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,1.70130116690864,0.179117045405697,0.581267877027924,0,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,2.67034867914099,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.192190067365106,1.40373983744043,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,6.66197860600182,0,0,0,0.238231775457789,0,0,0,0,0,0,12.7420912310136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,28.1718491990474,8.31501106331388,26.415820380534,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0.568967241427498,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,14.9183406378106,13.6971460136759,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,2.09672001890436,0,0,0,0,40.7353869251362,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.964518890790115,0.962776056180637,1.24632101408756,0,0,0,3.68978156359193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0,0,0,0,0,0,0,0,0,1.39879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,7.07818340086442,2.38457178078183,0.924205329202706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0.255524855279191,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,1.0989032999072,0,0,0,0,0,0,0,0,0,0,0.207216164163037,1.0243108625637,1.38251932362818,5.59295566466361,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,4.85710993059139,0,0,0,0,0,0,0,0,0,0.980593287015622,0.942706188406504,0,0,0,0,0,0,0,1.78553938605658,0.705789743431384,1.5245859670942,0,3.21110498383179,0,0,0,0,0,0,0,0,0,0.109265571963696,0,2.2437542543236,0.26721740526556,0.18378979906969,0,0.151557396436479,0,0,0,27.7204176471275,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0,15.8933225964782,6.84466602170562,14.6153955041655,8.31977582555046,0,0,0,0,0,2.34640942403454,0.366724332548599,22.7861859856814,1.33151354837103,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41130388857231,3.27295344709002,0.860413786167011,0.365921118388786,0.132529768321485,0.232387885739037,0,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860919069801795,0,0.439001141634502,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,1.70130116690864,0.179117045405697,0.581267877027924,0,0,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.802025881213139,2.67034867914099,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.826424576804891,0.192190067365106,1.40373983744043,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,6.66197860600182,0,0,0,0.238231775457789,0,0,0,0,0,0,12.7420912310136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,28.1718491990474,8.31501106331388,26.415820380534,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,0,0,1.28236427328014,0,0,0,0,0,0,0,0,0.568967241427498,1.01701460117107,0,0,0,0,0,0,0,0,0,0,0,14.9183406378106,13.6971460136759,0,0,0,0,1.5950057986596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,2.09672001890436,0,0,0,0,40.7353869251362,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.964518890790115,0.962776056180637,1.24632101408756,0,0,0,3.68978156359193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0,0,0,0,0,0,0,0,0,1.39879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981477185010256,7.07818340086442,2.38457178078183,0.924205329202706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64477330057155,0.496211178389294,0,0.255524855279191,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,1.0989032999072,0,0,0,0,0,0,0,0,0,0,0.207216164163037,1.0243108625637,1.38251932362818,5.59295566466361,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,4.85710993059139,0,0,0,0,0,0,0,0,0,0.980593287015622,0.942706188406504,0,0,0,0,0,0,0,1.78553938605658,0.705789743431384,1.5245859670942,0,3.21110498383179,0,0,0,0,0,0,0,0,0,0.109265571963696,0,2.2437542543236,0.26721740526556,0.18378979906969,0,0.151557396436479,0,0,0,27.7204176471275,0.23806443146374,0.129177819672012,0.0620747142958579,0,0,0,15.8933225964782,6.84466602170562,14.6153955041655,8.31977582555046,0,0,0,0,0,2.34640942403454,0.366724332548599,22.7861859856814,1.33151354837103,0,0 | ||
|short_description=p2@TMPRSS11E | |||
}} | }} |
Latest revision as of 07:52, 18 September 2015
Short description: | p2@TMPRSS11E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS11E_5end |
Coexpression cluster: | C629_esophagus_amniotic_tongue_throat_tonsil_uterus_salivary |
Association with transcript: | -2bp_to_ENST00000305363, NM_014058, uc003hdz.3_5end |
EntrezGene: | TMPRSS11E |
HGNC: | 24465 |
UniProt: | Q9UL52 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.68e-13 | 3 |
amnion mesenchymal stem cell | 3.71e-09 | 5 |
endo-epithelial cell | 2.29e-08 | 42 |
epithelial cell of alimentary canal | 2.50e-07 | 20 |
gingival epithelial cell | 5.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.39e-11 | 14 |