FFCP PHASE1:Hg19::chr1:163045698..163045709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5999 | |EntrezGene=5999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=10000 | |HGNC=10000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-356bp_to_AL137433_5end | |association_with_transcript=-356bp_to_AL137433_5end | ||
|cluster_id=chr1:163045698..163045709,+ | |||
|description=CAGE_peak_9_at_RGS4_5end | |description=CAGE_peak_9_at_RGS4_5end | ||
|id=chr1:163045698..163045709,+ | |id=chr1:163045698..163045709,+ | ||
|ontology_enrichment_celltype=CL:0002334!6.02e-07!12;CL:0000359!6.75e-07!32 | |ontology_enrichment_celltype=CL:0002334!6.02e-07!12;CL:0000359!6.75e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0002591;9.12e-14;1!CL:0002593;1.59e-07;2!CL:0002535;1.59e-07;2 | |ontology_enrichment_celltype_v019=CL:0002591;9.12e-14;1!CL:0002593;1.59e-07;2!CL:0002535;1.59e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.10e-13,1;CL:0002535,1.54e-07,2;CL:0002593,2.12e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!9.95e-16!14;DOID:193!1.61e-10!29;DOID:120!7.77e-10!27 | |ontology_enrichment_disease=DOID:2394!9.95e-16!14;DOID:193!1.61e-10!29;DOID:120!7.77e-10!27 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.64e-17;3!DOID:127;1.64e-17;3!DOID:0060072;2.21e-13;4!DOID:2394;1.16e-08;14!DOID:120;1.14e-07;27!DOID:193;3.75e-07;29 | |ontology_enrichment_disease_v019=DOID:0060084;1.64e-17;3!DOID:127;1.64e-17;3!DOID:0060072;2.21e-13;4!DOID:2394;1.16e-08;14!DOID:120;1.14e-07;27!DOID:193;3.75e-07;29 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.94e-18,3;DOID:127,9.94e-18,3;DOID:0060072,1.52e-13,4;DOID:2394,8.60e-09,14;DOID:120,9.24e-08,27;DOID:193,3.08e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.12e-11!6;UBERON:0001950!1.86e-10!20;UBERON:0002118!2.26e-10!5;UBERON:0004532!2.26e-10!5;UBERON:0002619!2.64e-09!22;UBERON:0001869!4.24e-09!32;UBERON:0001637!8.81e-09!42;UBERON:0003509!8.81e-09!42;UBERON:0004572!8.81e-09!42;UBERON:0000992!9.53e-09!13;UBERON:0001871!1.35e-08!7;UBERON:0001893!2.24e-08!34;UBERON:0002020!2.51e-08!34;UBERON:0003528!2.51e-08!34;UBERON:0000956!6.45e-08!25;UBERON:0000203!6.45e-08!25;UBERON:0002791!1.72e-07!33;UBERON:0002771!9.10e-07!3 | |ontology_enrichment_uberon=UBERON:0000200!2.12e-11!6;UBERON:0001950!1.86e-10!20;UBERON:0002118!2.26e-10!5;UBERON:0004532!2.26e-10!5;UBERON:0002619!2.64e-09!22;UBERON:0001869!4.24e-09!32;UBERON:0001637!8.81e-09!42;UBERON:0003509!8.81e-09!42;UBERON:0004572!8.81e-09!42;UBERON:0000992!9.53e-09!13;UBERON:0001871!1.35e-08!7;UBERON:0001893!2.24e-08!34;UBERON:0002020!2.51e-08!34;UBERON:0003528!2.51e-08!34;UBERON:0000956!6.45e-08!25;UBERON:0000203!6.45e-08!25;UBERON:0002791!1.72e-07!33;UBERON:0002771!9.10e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0003134;1.01e-08;33!UBERON:0000474;4.06e-08;37!UBERON:0002771;9.54e-08;2!UBERON:0000078;1.59e-07;2!UBERON:0006955;1.59e-07;2!UBERON:0004801;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0002456;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0000995;3.80e-07;17!UBERON:0003975;8.92e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0003134;1.01e-08;33!UBERON:0000474;4.06e-08;37!UBERON:0002771;9.54e-08;2!UBERON:0000078;1.59e-07;2!UBERON:0006955;1.59e-07;2!UBERON:0004801;1.59e-07;2!UBERON:0002012;1.59e-07;2!UBERON:0002456;1.59e-07;2!UBERON:0008886;1.59e-07;2!UBERON:0000995;3.80e-07;17!UBERON:0003975;8.92e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003134,1.75e-08,37;UBERON:0000474,1.75e-08,37;UBERON:0002771,9.25e-08,2;UBERON:0003100,1.21e-07,41;UBERON:0006955,1.54e-07,2;UBERON:0004801,1.54e-07,2;UBERON:0000078,1.75e-07,2;UBERON:0007497,1.75e-07,2;UBERON:0003643,1.75e-07,2;UBERON:0003504,1.75e-07,2;UBERON:0003469,1.75e-07,2;UBERON:0003496,1.75e-07,2;UBERON:0002012,1.75e-07,2;UBERON:0008886,1.75e-07,2;UBERON:0007303,1.75e-07,2;UBERON:0002061,1.75e-07,2;UBERON:0005432,1.75e-07,2;UBERON:0004363,1.75e-07,2;UBERON:0002456,2.12e-07,2 | |||
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| ||
|short_description=p9@RGS4 | |short_description=p9@RGS4 | ||
}} | }} |
Latest revision as of 08:00, 18 September 2015
Short description: | p9@RGS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RGS4_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_AL137433_5end |
EntrezGene: | RGS4 |
HGNC: | 10000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 1.10e-13 | 1 |
epithelial cell of cervix | 1.54e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ | 1.75e-08 | 37 |
female reproductive system | 1.75e-08 | 37 |
middle temporal gyrus | 9.25e-08 | 2 |
female organism | 1.21e-07 | 41 |
uterine epithelium | 1.54e-07 | 2 |
cervix epithelium | 1.54e-07 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.75e-07 | 2 |
developing epithelial placode | 1.75e-07 | 2 |
respiratory system arterial blood vessel | 1.75e-07 | 2 |
respiratory system blood vessel | 1.75e-07 | 2 |
respiratory system artery | 1.75e-07 | 2 |
head blood vessel | 1.75e-07 | 2 |
pulmonary artery | 1.75e-07 | 2 |
pulmonary vascular system | 1.75e-07 | 2 |
pharyngeal vasculature | 1.75e-07 | 2 |
truncus arteriosus | 1.75e-07 | 2 |
aortic sac | 1.75e-07 | 2 |
pharyngeal arch artery | 1.75e-07 | 2 |
internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.94e-18 | 3 |
leiomyoma | 9.94e-18 | 3 |
benign neoplasm | 1.52e-13 | 4 |
ovarian cancer | 8.60e-09 | 14 |
female reproductive organ cancer | 9.24e-08 | 27 |
reproductive organ cancer | 3.08e-07 | 29 |