FFCP PHASE1:Hg19::chr2:176994055..176994067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3234 | |EntrezGene=3234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5139 | |HGNC=5139 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBG7 | |UniProt=F8WBG7 | ||
|association_with_transcript=-354bp_to_ENST00000429017,NM_001199747,uc002ukn.2_5end | |association_with_transcript=-354bp_to_ENST00000429017,NM_001199747,uc002ukn.2_5end | ||
|cluster_id=chr2:176994055..176994067,+ | |||
|coexpression_cluster_id=C51 | |coexpression_cluster_id=C51 | ||
|description=CAGE_peak_14_at_HOXD8_5end | |description=CAGE_peak_14_at_HOXD8_5end | ||
|id=chr2:176994055..176994067,+ | |id=chr2:176994055..176994067,+ | ||
|ontology_enrichment_celltype=CL:0002553!6.47e-17!1 | |ontology_enrichment_celltype=CL:0002553!6.47e-17!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.00e-40;10!UBERON:0007687;2.00e-40;10!UBERON:0003104;1.90e-14;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.17e-21!3;UBERON:0004054!2.17e-21!3;UBERON:0000998!8.86e-17!1;UBERON:0006868!8.86e-17!1;UBERON:0001301!1.41e-16!1;UBERON:0005904!2.64e-16!4;UBERON:0002113!2.57e-14!27;UBERON:0003918!2.57e-14!27;UBERON:0005095!2.57e-14!27;UBERON:0007687!2.57e-14!27;UBERON:0000489!4.38e-12!32;UBERON:0006554!8.69e-09!44;UBERON:0001008!1.37e-08!45;UBERON:0000080!2.99e-08!18;UBERON:0002120!2.99e-08!18;UBERON:0004875!2.99e-08!18;UBERON:0005721!2.99e-08!18;UBERON:0005754!2.99e-08!18;UBERON:0007297!2.99e-08!18;UBERON:0004876!1.77e-07!20;UBERON:0003887!3.80e-07!21;UBERON:0005172!5.10e-07!55;UBERON:0005173!5.10e-07!55 | |ontology_enrichment_uberon=UBERON:0006947!2.17e-21!3;UBERON:0004054!2.17e-21!3;UBERON:0000998!8.86e-17!1;UBERON:0006868!8.86e-17!1;UBERON:0001301!1.41e-16!1;UBERON:0005904!2.64e-16!4;UBERON:0002113!2.57e-14!27;UBERON:0003918!2.57e-14!27;UBERON:0005095!2.57e-14!27;UBERON:0007687!2.57e-14!27;UBERON:0000489!4.38e-12!32;UBERON:0006554!8.69e-09!44;UBERON:0001008!1.37e-08!45;UBERON:0000080!2.99e-08!18;UBERON:0002120!2.99e-08!18;UBERON:0004875!2.99e-08!18;UBERON:0005721!2.99e-08!18;UBERON:0005754!2.99e-08!18;UBERON:0007297!2.99e-08!18;UBERON:0004876!1.77e-07!20;UBERON:0003887!3.80e-07!21;UBERON:0005172!5.10e-07!55;UBERON:0005173!5.10e-07!55 | ||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p14@HOXD8 | |short_description=p14@HOXD8 | ||
}} | }} |
Latest revision as of 09:06, 18 September 2015
Short description: | p14@HOXD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_HOXD8_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | -354bp_to_ENST00000429017, NM_001199747, uc002ukn.2_5end |
EntrezGene: | HOXD8 |
HGNC: | 5139 |
UniProt: | F8WBG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
urinary system structure | 1.08e-09 | 47 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
compound organ | 4.47e-07 | 68 |