FFCP PHASE1:Hg19::chr17:79849872..79849919,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:79849872..79849919,+
|short_description=p3@ANAPC11
|description=CAGE_peak_3_at_ANAPC11_5end
|association_with_transcript=54bp_to_ENST00000392376,NM_001002...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51529 | |EntrezGene=51529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14452 | |HGNC=14452 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NYG5 | |UniProt=Q9NYG5 | ||
|association_with_transcript=54bp_to_ENST00000392376,NM_001002249,uc002kcc.1_5end | |||
|cluster_id=chr17:79849872..79849919,+ | |||
|description=CAGE_peak_3_at_ANAPC11_5end | |||
|id=chr17:79849872..79849919,+ | |||
|ontology_enrichment_celltype=CL:0000012!2.21e-17!682;CL:0000548!4.95e-17!679;CL:0000004!4.95e-17!679;CL:0000255!4.95e-17!679;CL:0000066!8.94e-17!254;CL:0002321!3.50e-16!248;CL:0000220!5.90e-16!246;CL:0000003!6.17e-12!722;CL:0000055!2.09e-10!180;CL:0000222!1.38e-09!119;CL:0000095!1.65e-08!17;CL:0000123!1.65e-08!17;CL:0000144!2.19e-08!625;CL:0000333!5.96e-08!41;CL:0000243!2.55e-07!15;CL:0000125!2.55e-07!15;CL:0000030!2.55e-07!15;CL:0000339!2.55e-07!15;CL:0000133!6.91e-07!59;CL:0002319!6.96e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000095;1.54e-09;17!CL:0000243;3.69e-08;15!CL:0000125;3.69e-08;15!CL:0002319;4.49e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.17e-13,253;CL:0002321,1.21e-11,250;CL:0000095,1.25e-09,17;CL:0000123,1.25e-09,17;CL:0002319,2.88e-08,25;CL:0000243,3.00e-08,15;CL:0000125,3.00e-08,15;CL:0000030,3.00e-08,15;CL:0000339,3.00e-08,15;CL:0000222,2.64e-07,121;CL:0000333,2.82e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000339;3.69e-08;15 | |||
|ontology_enrichment_disease=DOID:14566!1.51e-28!239;DOID:162!2.65e-28!235;DOID:0050686!3.08e-14!137;DOID:0050687!3.74e-13!143;DOID:2531!7.61e-12!51;DOID:0060083!7.61e-12!51;DOID:305!6.49e-11!106;DOID:1240!8.54e-09!39;DOID:8692!5.03e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.05e-08;51!DOID:0060083;9.05e-08;51!DOID:8692;6.55e-07;31!DOID:1240;9.02e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.47e-25,239;DOID:162,1.24e-24,235;DOID:2531,4.88e-12,51;DOID:0060083,4.88e-12,51;DOID:0050686,1.26e-11,137;DOID:0050687,4.96e-11,143;DOID:305,2.45e-09,106;DOID:1240,1.41e-08,39;DOID:8692,3.26e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.09e-07!238;UBERON:0009142!1.09e-07!238;UBERON:0000490!1.34e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,2.7030733015166,6.28021051175185,2.18441372130172,1.31883489114227,2.10402800032079,1.98838425436749,0.672325146451775,3.61616716814386,3.65155045193687,1.46379839637152,2.95490539384291,7.34402488479311,4.38836610069323,3.14859585844162,5.61185142798825,2.63639543149086,1.22261449196722,1.64201178899891,1.73163718890094,0,0,0.619264493264304,1.83884244895785,3.0120591877825,0.369754010166788,2.94375362205146,3.2698923472107,0.880801318004542,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0,1.14950487990897,0,0.954053754535364,0,0,0,2.64342657158052,0,1.84368859342554,0,0,0,1.00311897234407,0,0,0,1.22551502573691,0,0.664601683750863,0,2.17755243533648,0.520237390239513,2.79544437826249,3.03985019564433,1.15921234294021,0.14828656316206,0.267540828089713,1.04535523804977,1.47302145506836,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.289648807765598,0,2.01210257911091,1.15076305659177,0.361439152384566,1.50401373190767,0.579386075843295,0.795285947051099,0.973269740605272,2.74150969775797,2.88248216701333,2.0202000709419,1.96468613246569,1.45718115317017,1.11235332835329,0.97364218096405,0.174129737299267,0.132957960518865,0,1.71598473234038,2.22874500797739,1.39133685156694,2.58070378531837,1.04142150482278,0,1.67799774483962,0.275118041940067,1.67195973229448,0.258416759169329,0.35576626268671,1.00416183829401,1.20848795132744,3.04108842287405,0.976248230192678,0.735326160691737,0.81014194788176,0.625098097988558,1.57170560838319,1.57656072676651,4.5994991239765,1.89853131913626,1.64881569537367,0,0,1.74437620857014,0,1.51956613997496,0.529636723252875,0,3.54668382198357,3.92474320099615,3.20246987189115,2.22000793575444,0.311211035399766,0.538842688278752,1.79808093424805,0.908144565869588,1.15235184896,1.40592859100278,0,0.570471821544449,1.04614076386261,2.11382097558777,2.26622122115384,2.38766371393822,0.816616685019573,2.94802361548243,1.03325781175765,0,0.494533858557114,0,2.15585442544872,2.86171393721913,0.750711119231785,0.554128230968366,0,2.14541457059314,1.35214253015937,2.1552114800404,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.92747276314595,0,0.37223371266318,0.843881661206331,0.876933046450788,0.252433774244115,0.368199594569197,0,0.355009592516614,1.20902517873168,0.847802961552438,0.773043412653187,1.09098448236334,0.573609190778008,1.58565817968474,1.32529768321485,1.2781333715647,1.24393266018445,2.27088765788066,4.01475094983413,0,0,2.76269842704961,0,1.44375896333917,3.43089720115547,5.22612539242115,3.13314338848527,4.19117096383097,2.83243277320128,2.84724742933316,5.12358971008625,2.94332197688019,3.07797725557112,4.42893272774789,11.2193419042757,3.7041661019826,1.47008711385542,0,1.96565443335525,0,11.4780405847809,0.983907508344908,1.88724591328378,0.658501712451753,1.1240175325762,1.10581869652794,0.462942225792648,0.977424915930974,3.11980435583874,1.44331342025273,2.43453850447661,0.70445216541493,0.288732895522148,0.925971025153221,1.33177906564219,6.3216351836742,6.86788929675898,0.246217006087397,0,0.445893486866185,2.81201501960331,0.503946384596579,0.425325291727159,0.447792613514241,0.871901815541886,1.15014803749563,0,0.44024217006613,0,0,0,1.39695367442772,0.381988425558278,4.68869788840188,6.84289784090821,1.23392991243988,1.50171528921959,1.42913216315289,1.79409734952577,3.05172048183296,1.3200891447771,0.129271715757778,0,0.845302752556,0.26593811658487,2.08014873822732,3.08648849114571,1.41849132023278,4.26275486425759,1.42977993658148,1.62786481617433,2.46972101034231,0.325736184293735,1.77695974371273,1.58390374586686,0,0,0.799783929456456,1.2162378064119,0,0,0.239624855491583,1.14861935834114,4.27910715122155,1.88215698667853,1.43833425785268,0.716243852959582,3.02629888782524,0,0.646882724578552,0,0,0,0,1.67516265334349,0.637938751653163,0,0,0,0.24538298343828,1.50051156317903,2.98391526069709,0.831883446123229,1.24900292158013,1.10391690523754,0.702848489956279,1.20378439891088,0,1.03473071292505,1.99267679560631,2.76553752812555,0.695068915744663,1.56640925970192,2.05886054286514,0,0,0.106727557803444,0.303127571446259,4.99306318531491,2.11673205330776,0,0,0.561320188866147,0,0.511707249066704,0.804269605718038,0,1.23367755042124,1.24293207719189,0.657017248110473,1.55776328755086,1.39452454151951,1.32945394550784,1.00253235151642,0.460404944679482,1.03333003348146,1.0925470080403,1.18011973463482,1.35359883872224,1.15523005656622,7.84349769176855,10.2297457257282,0.633309773357254,2.27466768141793,2.04112446331819,2.59099099322567,1.54227252690289,2.16757150035082,6.52196706011309,1.78413391131527,1.66215201785745,4.47749509444357,0.657779629937804,1.8300481571743,2.56450125116389,1.31205858279882,0.650756789328606,0.309123034943167,10.8967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| ||
|short_description=p3@ANAPC11 | |||
}} | }} |
Latest revision as of 09:22, 18 September 2015
Short description: | p3@ANAPC11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ANAPC11_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_ENST00000392376, NM_001002249, uc002kcc.1_5end |
EntrezGene: | ANAPC11 |
HGNC: | 14452 |
UniProt: | Q9NYG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.17e-13 | 253 |
embryonic cell | 1.21e-11 | 250 |
neuron associated cell | 1.25e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.25e-09 | 17 |
neural cell | 2.88e-08 | 25 |
glial cell (sensu Vertebrata) | 3.00e-08 | 15 |
glial cell | 3.00e-08 | 15 |
glioblast | 3.00e-08 | 15 |
glioblast (sensu Vertebrata) | 3.00e-08 | 15 |
mesodermal cell | 2.64e-07 | 121 |
migratory neural crest cell | 2.82e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.47e-25 | 239 |
cancer | 1.24e-24 | 235 |
hematologic cancer | 4.88e-12 | 51 |
immune system cancer | 4.88e-12 | 51 |
organ system cancer | 1.26e-11 | 137 |
cell type cancer | 4.96e-11 | 143 |
carcinoma | 2.45e-09 | 106 |
leukemia | 1.41e-08 | 39 |
myeloid leukemia | 3.26e-07 | 31 |