FFCP PHASE1:Hg19::chr19:43422019..43422057,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5675 | |EntrezGene=5675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9523 | |HGNC=9523 | ||
|TSSclassifier=strong | |||
|UniProt=B5MC00,B5MCE1,Q00889 | |UniProt=B5MC00,B5MCE1,Q00889 | ||
|association_with_transcript=0bp_to_ENST00000402456,ENST00000402603,NM_001031850,uc002ovf.1,uc002ovg.1,uc002ovj.1_5end | |association_with_transcript=0bp_to_ENST00000402456,ENST00000402603,NM_001031850,uc002ovf.1,uc002ovg.1,uc002ovj.1_5end | ||
|cluster_id=chr19:43422019..43422057,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PSG6_5end | |description=CAGE_peak_1_at_PSG6_5end | ||
|id=chr19:43422019..43422057,- | |id=chr19:43422019..43422057,- | ||
|ontology_enrichment_celltype=CL:0002620!1.28e-14!23;CL:0000057!1.40e-10!75 | |ontology_enrichment_celltype=CL:0002620!1.28e-14!23;CL:0000057!1.40e-10!75 | ||
|ontology_enrichment_celltype_v019=CL:0002621;6.21e-10;3!CL:0000077;5.01e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,4.12e-10,3;CL:0000077,4.85e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.79e-09;1 | |||
|ontology_enrichment_disease=DOID:17!1.14e-09!5;DOID:450!1.14e-09!5;DOID:66!1.14e-09!5;DOID:423!1.14e-09!5;DOID:0080000!1.14e-09!5;DOID:11722!1.14e-09!5 | |ontology_enrichment_disease=DOID:17!1.14e-09!5;DOID:450!1.14e-09!5;DOID:66!1.14e-09!5;DOID:423!1.14e-09!5;DOID:0080000!1.14e-09!5;DOID:11722!1.14e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:4556;1.82e-10;3!DOID:6193;2.09e-08;1!DOID:3112;2.59e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.87e-10,3;DOID:6193,2.17e-08,1;DOID:3112,2.50e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!8.27e-13!40;UBERON:0002199!6.00e-12!45;UBERON:0002416!6.00e-12!45;UBERON:0000060!1.05e-07!12;UBERON:0003124!4.66e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.21e-10;3!UBERON:0004913;4.56e-08;1!UBERON:0003703;4.56e-08;1!UBERON:0001174;4.56e-08;1!UBERON:0004914;4.56e-08;1!UBERON:0001987;5.54e-08;4!UBERON:0004807;1.18e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.12e-10,3;UBERON:0003124,9.57e-10,7;UBERON:0005631,3.56e-08,14;UBERON:0000158,3.56e-08,14;UBERON:0004913,4.72e-08,1;UBERON:0003703,4.72e-08,1;UBERON:0001174,4.72e-08,1;UBERON:0004914,4.72e-08,1;UBERON:0001987,4.90e-08,4;UBERON:0004340,4.90e-08,4 | |||
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| ||
|short_description=p1@PSG6 | |short_description=p1@PSG6 | ||
}} | }} |
Latest revision as of 10:15, 18 September 2015
Short description: | p1@PSG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG6_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000402456, ENST00000402603, NM_001031850, uc002ovf.1, uc002ovg.1, uc002ovj.1_5end |
EntrezGene: | PSG6 |
HGNC: | 9523 |
UniProt: | B5MC00B5MCE1Q00889 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 4.12e-10 | 3 |
mesothelial cell | 4.85e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 4.12e-10 | 3 |
chorion | 9.57e-10 | 7 |
extraembryonic membrane | 3.56e-08 | 14 |
membranous layer | 3.56e-08 | 14 |
hepatopancreatic ampulla | 4.72e-08 | 1 |
extrahepatic bile duct | 4.72e-08 | 1 |
common bile duct | 4.72e-08 | 1 |
duodenal papilla | 4.72e-08 | 1 |
placenta | 4.90e-08 | 4 |
allantois | 4.90e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.87e-10 | 3 |
epithelioid sarcoma | 2.17e-08 | 1 |
papillary adenocarcinoma | 2.50e-08 | 1 |