FFCP PHASE1:Hg19::chr19:43422063..43422086,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5675 | |EntrezGene=5675 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9523 | |HGNC=9523 | ||
|TSSclassifier=strong | |||
|UniProt=Q00889 | |UniProt=Q00889 | ||
|association_with_transcript=-20bp_to_NM_001031850,uc002ovf.1,uc002ovg.1,uc002ovj.1_5end | |association_with_transcript=-20bp_to_NM_001031850,uc002ovf.1,uc002ovg.1,uc002ovj.1_5end | ||
|cluster_id=chr19:43422063..43422086,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_PSG6_5end | |description=CAGE_peak_3_at_PSG6_5end | ||
|id=chr19:43422063..43422086,- | |id=chr19:43422063..43422086,- | ||
|ontology_enrichment_celltype=CL:0002537!1.02e-11!5;CL:0002588!4.53e-08!2;CL:1000415!9.10e-08!2 | |ontology_enrichment_celltype=CL:0002537!1.02e-11!5;CL:0002588!4.53e-08!2;CL:1000415!9.10e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;2.02e-17;5!CL:0002541;1.20e-13;3!CL:0000349;2.75e-12;19!CL:0002620;9.16e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.91e-17,5;CL:0002541,9.60e-14,3;CL:0000349,2.96e-12,19;CL:0002620,8.54e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.53e-11;1 | |||
|ontology_enrichment_disease=DOID:3350!1.54e-08!2;DOID:3908!9.96e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3350;4.67e-20;2!DOID:6193;3.40e-11;1!DOID:3571;1.27e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,5.40e-20,2;DOID:6193,3.41e-11,1;DOID:3571,1.46e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!2.25e-15!14;UBERON:0000158!2.25e-15!14;UBERON:0000305!1.86e-12!7;UBERON:0004871!7.38e-11!8;UBERON:0000478!2.23e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.16e-23;10!UBERON:0000158;2.16e-23;10!UBERON:0000478;7.83e-14;24!UBERON:0003124;1.20e-13;3!UBERON:0000920;1.20e-13;3!UBERON:0000305;1.28e-12;7!UBERON:0007195;3.76e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.49e-24,14;UBERON:0000158,6.49e-24,14;UBERON:0000478,8.39e-14,24;UBERON:0000920,9.60e-14,3;UBERON:0003124,4.58e-13,7;UBERON:0000305,1.67e-12,7;UBERON:0007195,3.76e-11,1;UBERON:0004871,5.18e-11,8 | |||
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| ||
|short_description=p3@PSG6 | |short_description=p3@PSG6 | ||
}} | }} |
Latest revision as of 10:15, 18 September 2015
Short description: | p3@PSG6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PSG6_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | -20bp_to_NM_001031850, uc002ovf.1, uc002ovg.1, uc002ovj.1_5end |
EntrezGene: | PSG6 |
HGNC: | 9523 |
UniProt: | Q00889 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.91e-17 | 5 |
chorionic membrane mesenchymal stem cell | 9.60e-14 | 3 |
extraembryonic cell | 2.96e-12 | 19 |
skin fibroblast | 8.54e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.49e-24 | 14 |
membranous layer | 6.49e-24 | 14 |
extraembryonic structure | 8.39e-14 | 24 |
egg chorion | 9.60e-14 | 3 |
chorion | 4.58e-13 | 7 |
amnion | 1.67e-12 | 7 |
stroma of bone marrow | 3.76e-11 | 1 |
somatic layer of lateral plate mesoderm | 5.18e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 5.40e-20 | 2 |
epithelioid sarcoma | 3.41e-11 | 1 |
liver cancer | 1.46e-10 | 1 |