FFCP PHASE1:Hg19::chr2:74517441..74517450,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57835 | |EntrezGene=57835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18168 | |HGNC=18168 | ||
|TSSclassifier=strong | |||
|UniProt=C9JNL6 | |UniProt=C9JNL6 | ||
|association_with_transcript=381bp_to_ENST00000432728_5end | |association_with_transcript=381bp_to_ENST00000432728_5end | ||
|cluster_id=chr2:74517441..74517450,- | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_10_at_SLC4A5_5end | |description=CAGE_peak_10_at_SLC4A5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002536!2.32e-12!2 | |ontology_enrichment_celltype=CL:0002536!2.32e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2 | |ontology_enrichment_celltype_v019=CL:0000047;5.96e-34;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.35e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0007123;1.71e-14;5 | |ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!UBERON:0007123;1.71e-14;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002336!5.13e-23!1;UBERON:0001018!5.13e-23!1;UBERON:0002473!5.13e-23!1;UBERON:0005340!5.13e-23!1;UBERON:0002316!5.13e-23!1;UBERON:0003544!5.13e-23!1;UBERON:0001020!5.13e-23!1;UBERON:0005970!5.13e-23!1;UBERON:0002437!5.13e-23!1;UBERON:0002046!1.62e-18!5;UBERON:0004117!1.62e-18!5;UBERON:0007689!1.62e-18!5;UBERON:0007123!1.62e-18!5;UBERON:0003091!1.62e-18!5;UBERON:0005162!3.24e-12!2;UBERON:0000122!3.24e-12!2;UBERON:0009722!5.87e-09!11;UBERON:0007690!5.87e-09!11;UBERON:0001896!1.30e-08!3;UBERON:0005290!1.30e-08!3;UBERON:0010096!1.30e-08!3;UBERON:0008814!8.33e-07!15 | |ontology_enrichment_uberon=UBERON:0002336!5.13e-23!1;UBERON:0001018!5.13e-23!1;UBERON:0002473!5.13e-23!1;UBERON:0005340!5.13e-23!1;UBERON:0002316!5.13e-23!1;UBERON:0003544!5.13e-23!1;UBERON:0001020!5.13e-23!1;UBERON:0005970!5.13e-23!1;UBERON:0002437!5.13e-23!1;UBERON:0002046!1.62e-18!5;UBERON:0004117!1.62e-18!5;UBERON:0007689!1.62e-18!5;UBERON:0007123!1.62e-18!5;UBERON:0003091!1.62e-18!5;UBERON:0005162!3.24e-12!2;UBERON:0000122!3.24e-12!2;UBERON:0009722!5.87e-09!11;UBERON:0007690!5.87e-09!11;UBERON:0001896!1.30e-08!3;UBERON:0005290!1.30e-08!3;UBERON:0010096!1.30e-08!3;UBERON:0008814!8.33e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0002046;1.71e-14;5 | |ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5!UBERON:0002046;1.71e-14;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11 | |||
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|short_description=p10@SLC4A5 | |short_description=p10@SLC4A5 | ||
}} | }} |
Latest revision as of 10:31, 18 September 2015
Short description: | p10@SLC4A5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC4A5_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 381bp_to_ENST00000432728_5end |
EntrezGene: | SLC4A5 |
HGNC: | 18168 |
UniProt: | C9JNL6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.35e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.83e-14 | 5 |
pharyngeal pouch | 1.83e-14 | 5 |
thyroid diverticulum | 1.83e-14 | 5 |
pharyngeal pouch 2 | 1.83e-14 | 5 |
thyroid primordium | 1.83e-14 | 5 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
entire pharyngeal arch endoderm | 2.63e-07 | 11 |
early pharyngeal endoderm | 2.63e-07 | 11 |