FFCP PHASE1:Hg19::chr16:89165098..89165114,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=197322 | |EntrezGene=197322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27288 | |HGNC=27288 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2G6 | |UniProt=F5H2G6 | ||
|association_with_transcript=-4bp_to_ENST00000542688_5end | |association_with_transcript=-4bp_to_ENST00000542688_5end | ||
|cluster_id=chr16:89165098..89165114,+ | |||
|coexpression_cluster_id=C62 | |coexpression_cluster_id=C62 | ||
|description=CAGE_peak_4_at_ACSF3_5end | |description=CAGE_peak_4_at_ACSF3_5end | ||
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|ontology_enrichment_celltype=CL:0000945!7.23e-32!24;CL:0000826!7.23e-32!24;CL:0000236!1.83e-24!14;CL:0000542!1.51e-22!53;CL:0000051!1.51e-22!53;CL:0000838!2.49e-21!52;CL:0002031!8.56e-09!124;CL:0000037!1.25e-08!172;CL:0000566!1.25e-08!172;CL:0002087!1.28e-08!119;CL:0000738!4.12e-08!140;CL:0002032!4.98e-08!165;CL:0000837!4.98e-08!165;CL:0000988!1.24e-07!182;CL:0000817!6.72e-07!3 | |ontology_enrichment_celltype=CL:0000945!7.23e-32!24;CL:0000826!7.23e-32!24;CL:0000236!1.83e-24!14;CL:0000542!1.51e-22!53;CL:0000051!1.51e-22!53;CL:0000838!2.49e-21!52;CL:0002031!8.56e-09!124;CL:0000037!1.25e-08!172;CL:0000566!1.25e-08!172;CL:0002087!1.28e-08!119;CL:0000738!4.12e-08!140;CL:0002032!4.98e-08!165;CL:0000837!4.98e-08!165;CL:0000988!1.24e-07!182;CL:0000817!6.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.49e-28;24!CL:0000236;1.77e-26;13!CL:0000542;2.73e-15;53!CL:0000764;7.07e-15;2!CL:0000558;7.07e-15;2!CL:0000785;6.50e-09;1!CL:0000819;6.50e-09;1 | |ontology_enrichment_celltype_v019=CL:0000945;1.49e-28;24!CL:0000236;1.77e-26;13!CL:0000542;2.73e-15;53!CL:0000764;7.07e-15;2!CL:0000558;7.07e-15;2!CL:0000785;6.50e-09;1!CL:0000819;6.50e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.06e-28,24;CL:0000826,1.06e-28,24;CL:0000236,1.28e-24,14;CL:0000838,4.47e-21,52;CL:0000542,1.24e-20,53;CL:0000051,1.24e-20,53;CL:0000764,9.41e-15,2;CL:0000765,9.41e-15,2;CL:0000050,9.41e-15,2;CL:0000038,9.41e-15,2;CL:0000558,9.41e-15,2;CL:0000547,9.41e-15,2;CL:0000549,9.41e-15,2;CL:0000550,9.41e-15,2;CL:0000552,9.41e-15,2;CL:0002031,1.75e-10,120;CL:0000819,6.50e-09,1;CL:0002087,4.06e-08,115;CL:0000037,8.48e-08,168;CL:0000738,1.11e-07,136;CL:0000988,2.99e-07,177;CL:0002032,4.06e-07,161;CL:0000837,4.06e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.73e-15;53!UBERON:0001045;8.78e-09;1 | |ontology_enrichment_development_v019=CL:0000051;2.73e-15;53!UBERON:0001045;8.78e-09;1 | ||
|ontology_enrichment_disease=DOID:0060058!6.84e-08!10;DOID:2531!7.87e-07!51;DOID:0060083!7.87e-07!51 | |ontology_enrichment_disease=DOID:0060058!6.84e-08!10;DOID:2531!7.87e-07!51;DOID:0060083!7.87e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.97e-18;10!DOID:0060073;6.50e-09;1!DOID:8675;6.50e-09;1 | |ontology_enrichment_disease_v019=DOID:0060058;3.97e-18;10!DOID:0060073;6.50e-09;1!DOID:8675;6.50e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.73e-18,10;DOID:0060073,6.50e-09,1;DOID:8675,6.50e-09,1;DOID:2531,5.42e-08,51;DOID:0060083,5.42e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.10e-09!115;UBERON:0000178!2.30e-08!15;UBERON:0000179!2.30e-08!15;UBERON:0000463!2.30e-08!15 | |ontology_enrichment_uberon=UBERON:0007023!5.10e-09!115;UBERON:0000178!2.30e-08!15;UBERON:0000179!2.30e-08!15;UBERON:0000463!2.30e-08!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.16e-16;2!UBERON:0005058;5.16e-16;2!UBERON:0009113;5.16e-16;2!UBERON:0000178;8.35e-12;15!UBERON:0000179;8.35e-12;15!UBERON:0000463;8.35e-12;15!UBERON:0002390;1.29e-09;32!UBERON:0001154;8.78e-09;1!UBERON:0001153;8.78e-09;1!UBERON:0009854;8.78e-09;1!UBERON:0002372;1.47e-08;1!UBERON:0001961;1.47e-08;1!UBERON:0001744;1.47e-08;1!UBERON:0001042;1.47e-08;1!UBERON:0001735;1.47e-08;1!UBERON:0002193;2.54e-08;42!UBERON:0004177;6.48e-07;5!UBERON:0005057;6.48e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;5.16e-16;2!UBERON:0005058;5.16e-16;2!UBERON:0009113;5.16e-16;2!UBERON:0000178;8.35e-12;15!UBERON:0000179;8.35e-12;15!UBERON:0000463;8.35e-12;15!UBERON:0002390;1.29e-09;32!UBERON:0001154;8.78e-09;1!UBERON:0001153;8.78e-09;1!UBERON:0009854;8.78e-09;1!UBERON:0002372;1.47e-08;1!UBERON:0001961;1.47e-08;1!UBERON:0001744;1.47e-08;1!UBERON:0001042;1.47e-08;1!UBERON:0001735;1.47e-08;1!UBERON:0002193;2.54e-08;42!UBERON:0004177;6.48e-07;5!UBERON:0005057;6.48e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,9.38e-12,15;UBERON:0000179,9.38e-12,15;UBERON:0000463,9.38e-12,15;UBERON:0001154,9.46e-09,1;UBERON:0001153,9.46e-09,1;UBERON:0001045,9.46e-09,1;UBERON:0002372,1.48e-08,1;UBERON:0001961,1.48e-08,1;UBERON:0001744,1.48e-08,1;UBERON:0001735,1.48e-08,1;UBERON:0002370,1.84e-08,4;UBERON:0005058,1.84e-08,4;UBERON:0009113,1.84e-08,4;UBERON:0003295,1.84e-08,4;UBERON:0005562,1.84e-08,4;UBERON:0001042,3.32e-07,10;UBERON:0009145,3.32e-07,10;UBERON:0007023,8.52e-07,114 | |||
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| ||
|short_description=p4@ACSF3 | |short_description=p4@ACSF3 | ||
}} | }} |
Latest revision as of 10:56, 18 September 2015
Short description: | p4@ACSF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACSF3_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | -4bp_to_ENST00000542688_5end |
EntrezGene: | ACSF3 |
HGNC: | 27288 |
UniProt: | F5H2G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.06e-28 | 24 |
pro-B cell | 1.06e-28 | 24 |
B cell | 1.28e-24 | 14 |
lymphoid lineage restricted progenitor cell | 4.47e-21 | 52 |
lymphocyte | 1.24e-20 | 53 |
common lymphoid progenitor | 1.24e-20 | 53 |
erythroid lineage cell | 9.41e-15 | 2 |
erythroblast | 9.41e-15 | 2 |
megakaryocyte-erythroid progenitor cell | 9.41e-15 | 2 |
erythroid progenitor cell | 9.41e-15 | 2 |
reticulocyte | 9.41e-15 | 2 |
proerythroblast | 9.41e-15 | 2 |
basophilic erythroblast | 9.41e-15 | 2 |
polychromatophilic erythroblast | 9.41e-15 | 2 |
orthochromatic erythroblast | 9.41e-15 | 2 |
hematopoietic lineage restricted progenitor cell | 1.75e-10 | 120 |
B-1 B cell | 6.50e-09 | 1 |
nongranular leukocyte | 4.06e-08 | 115 |
hematopoietic stem cell | 8.48e-08 | 168 |
leukocyte | 1.11e-07 | 136 |
hematopoietic cell | 2.99e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.06e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.06e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 9.38e-12 | 15 |
haemolymphatic fluid | 9.38e-12 | 15 |
organism substance | 9.38e-12 | 15 |
vermiform appendix | 9.46e-09 | 1 |
caecum | 9.46e-09 | 1 |
midgut | 9.46e-09 | 1 |
tonsil | 1.48e-08 | 1 |
mucosa-associated lymphoid tissue | 1.48e-08 | 1 |
lymphoid tissue | 1.48e-08 | 1 |
tonsillar ring | 1.48e-08 | 1 |
thymus | 1.84e-08 | 4 |
hemolymphoid system gland | 1.84e-08 | 4 |
thymic region | 1.84e-08 | 4 |
pharyngeal gland | 1.84e-08 | 4 |
thymus primordium | 1.84e-08 | 4 |
chordate pharynx | 3.32e-07 | 10 |
pharyngeal region of foregut | 3.32e-07 | 10 |
adult organism | 8.52e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.73e-18 | 10 |
lymphatic system cancer | 6.50e-09 | 1 |
lymphosarcoma | 6.50e-09 | 1 |
hematologic cancer | 5.42e-08 | 51 |
immune system cancer | 5.42e-08 | 51 |