FFCP PHASE1:Hg19::chr9:99064452..99064463,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3293 | |EntrezGene=3293 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5212 | |HGNC=5212 | ||
|TSSclassifier=strong | |||
|UniProt=P37058,Q6FH62,Q5U0Q6 | |UniProt=P37058,Q6FH62,Q5U0Q6 | ||
|association_with_transcript=-18bp_to_ENST00000375263,NM_000197,uc004awa.1,uc010msc.1_5end | |||
|cluster_id=chr9:99064452..99064463,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_HSD17B3_5end | |||
|id=chr9:99064452..99064463,- | |||
|ontology_enrichment_celltype=CL:0002076!8.97e-14!43;CL:0000223!1.70e-13!59;CL:0002251!2.44e-12!21;CL:0000066!1.63e-10!254;CL:0000076!8.18e-09!62;CL:0000068!1.49e-08!3;CL:0000069!1.49e-08!3;CL:0000307!1.49e-08!3;CL:0000377!1.49e-08!3;CL:0002586!1.66e-08!3;CL:0002336!8.49e-07!1;CL:0002261!8.49e-07!1;CL:0002170!8.49e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000083;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,1.80e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.94e-23;10!UBERON:0005564;4.94e-23;10 | |||
|ontology_enrichment_disease=DOID:1749!1.27e-24!14;DOID:305!1.00e-08!106;DOID:5662!8.98e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4074;1.29e-13;2!DOID:4905;1.29e-13;2!DOID:3498;1.29e-13;2!DOID:1749;4.57e-08;14!DOID:1793;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,1.21e-13,2;DOID:4905,1.21e-13,2;DOID:3498,1.21e-13,2;DOID:1749,4.34e-08,14;DOID:1793,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.09e-18!5;UBERON:0003343!8.24e-14!4;UBERON:0004785!8.24e-14!4;UBERON:0000966!1.24e-10!5;UBERON:0005388!1.24e-10!5;UBERON:0001802!1.24e-10!5;UBERON:0001781!1.66e-08!3;UBERON:0001782!1.66e-08!3;UBERON:0005424!1.66e-08!3;UBERON:0000344!7.54e-08!12;UBERON:0003126!1.15e-07!7;UBERON:0001005!1.15e-07!7;UBERON:0000473!2.93e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.42e-28;8!UBERON:0003135;5.15e-21;11!UBERON:0000991;2.30e-11;21!UBERON:0003101;7.04e-11;22!UBERON:0000079;7.04e-11;22!UBERON:0002323;4.81e-08;45!UBERON:0003343;1.40e-07;4!UBERON:0004785;1.40e-07;4!UBERON:0002553;7.30e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.49e-28,8;UBERON:0003135,5.33e-21,11;UBERON:0000991,2.34e-11,21;UBERON:0009196,2.34e-11,21;UBERON:0009117,2.34e-11,21;UBERON:0005564,2.34e-11,21;UBERON:0004176,7.16e-11,22;UBERON:0003101,7.16e-11,22;UBERON:0000079,7.16e-11,22;UBERON:0002323,4.51e-09,46;UBERON:0004458,1.54e-08,49;UBERON:0003886,8.77e-08,54;UBERON:0003343,1.40e-07,4;UBERON:0004785,1.40e-07,4;UBERON:0002553,6.26e-07,61 | |||
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|short_description=p1@HSD17B3 | |||
}} | }} |
Latest revision as of 11:22, 18 September 2015
Short description: | p1@HSD17B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSD17B3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -18bp_to_ENST00000375263, NM_000197, uc004awa.1, uc010msc.1_5end |
EntrezGene: | HSD17B3 |
HGNC: | 5212 |
UniProt: | P37058Q6FH62Q5U0Q6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.80e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.49e-28 | 8 |
male reproductive organ | 5.33e-21 | 11 |
gonad | 2.34e-11 | 21 |
indifferent external genitalia | 2.34e-11 | 21 |
indifferent gonad | 2.34e-11 | 21 |
gonad primordium | 2.34e-11 | 21 |
external genitalia | 7.16e-11 | 22 |
male organism | 7.16e-11 | 22 |
male reproductive system | 7.16e-11 | 22 |
body cavity | 4.51e-09 | 46 |
body cavity or lining | 1.54e-08 | 49 |
body cavity precursor | 8.77e-08 | 54 |
mucosa of oral region | 1.40e-07 | 4 |
respiratory system mucosa | 1.40e-07 | 4 |
anatomical cavity | 6.26e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 1.21e-13 | 2 |
pancreatic carcinoma | 1.21e-13 | 2 |
pancreatic ductal adenocarcinoma | 1.21e-13 | 2 |
squamous cell carcinoma | 4.34e-08 | 14 |
pancreatic cancer | 1.80e-07 | 4 |