FFCP PHASE1:Hg19::chr2:74776606..74776631,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84695 | |EntrezGene=84695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13869 | |HGNC=13869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_ENST00000420535_5end | |association_with_transcript=-20bp_to_ENST00000420535_5end | ||
|cluster_id=chr2:74776606..74776631,- | |||
|description=CAGE_peak_5_at_LOXL3_5end | |description=CAGE_peak_5_at_LOXL3_5end | ||
|id=chr2:74776606..74776631,- | |id=chr2:74776606..74776631,- | ||
|ontology_enrichment_celltype=CL:0000066!2.36e-12!254;CL:0000039!6.17e-09!7;CL:0000586!6.17e-09!7;CL:0000082!1.38e-08!19;CL:0002322!6.58e-08!5 | |ontology_enrichment_celltype=CL:0000066!2.36e-12!254;CL:0000039!6.17e-09!7;CL:0000586!6.17e-09!7;CL:0000082!1.38e-08!19;CL:0002322!6.58e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;9.50e-14;2!CL:0000242;9.50e-14;2!CL:0002535;1.84e-12;2!CL:0002322;3.50e-11;5!CL:0000540;1.50e-09;6!CL:0000404;1.50e-09;6!CL:0002319;1.22e-07;25!CL:0002032;4.60e-07;1!CL:0000557;4.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,9.52e-14,2;CL:0002535,2.62e-12,2;CL:0002322,3.50e-11,5;CL:0000540,1.15e-09,6;CL:0000031,1.15e-09,6;CL:0000404,1.15e-09,6;CL:0002319,1.09e-07,25;CL:0000047,2.34e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;1.50e-09;6 | |||
|ontology_enrichment_disease=DOID:305!1.72e-24!106;DOID:0050687!2.01e-24!143;DOID:14566!7.89e-19!239;DOID:162!1.69e-18!235;DOID:1749!4.65e-09!14;DOID:1324!3.23e-08!15;DOID:0050615!1.56e-07!16;DOID:4362!8.47e-07!5 | |ontology_enrichment_disease=DOID:305!1.72e-24!106;DOID:0050687!2.01e-24!143;DOID:14566!7.89e-19!239;DOID:162!1.69e-18!235;DOID:1749!4.65e-09!14;DOID:1324!3.23e-08!15;DOID:0050615!1.56e-07!16;DOID:4362!8.47e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4362;3.50e-11;5!DOID:3371;2.22e-07;1!DOID:4549;2.22e-07;1!DOID:5861;2.22e-07;1!DOID:6496;2.22e-07;1!DOID:1799;4.60e-07;1!DOID:10165;4.60e-07;1!DOID:1798;4.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.47e-11,5;DOID:0050687,8.28e-11,143;DOID:305,9.36e-11,106;DOID:162,1.49e-07,235;DOID:3371,2.52e-07,1;DOID:4549,2.52e-07,1;DOID:5861,2.52e-07,1;DOID:6496,2.52e-07,1;DOID:14566,2.65e-07,239;DOID:1799,3.21e-07,1;DOID:10165,3.21e-07,1;DOID:1798,3.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004802!1.38e-08!19;UBERON:0000115!1.38e-08!19;UBERON:0008947!2.73e-08!38;UBERON:0003258!2.73e-08!38;UBERON:0000072!3.41e-08!46;UBERON:0000065!5.15e-07!53;UBERON:0002048!5.86e-07!22;UBERON:0000117!5.86e-07!22;UBERON:0000171!5.86e-07!22;UBERON:0000170!5.86e-07!22;UBERON:0005597!5.86e-07!22;UBERON:0000118!5.86e-07!22 | |ontology_enrichment_uberon=UBERON:0004802!1.38e-08!19;UBERON:0000115!1.38e-08!19;UBERON:0008947!2.73e-08!38;UBERON:0003258!2.73e-08!38;UBERON:0000072!3.41e-08!46;UBERON:0000065!5.15e-07!53;UBERON:0002048!5.86e-07!22;UBERON:0000117!5.86e-07!22;UBERON:0000171!5.86e-07!22;UBERON:0000170!5.86e-07!22;UBERON:0005597!5.86e-07!22;UBERON:0000118!5.86e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.84e-12;2!UBERON:0004801;1.84e-12;2!UBERON:0000002;2.12e-09;6!UBERON:0001560;2.12e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,2.62e-12,2;UBERON:0004801,2.62e-12,2;UBERON:0000002,2.60e-09,6;UBERON:0001560,2.60e-09,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.609868530647977,1.45782745153634,1.16193942869518,0.725627385107593,3.02785021050754,3.6497735907583,0,0,0,0,0,0.591534000199219,0.505754070234305,0.241011029883482,0.55146986366197,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.766021480529467,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,1.0077309914171,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,1.04171104434093,0,0,0,0.762760950878299,0.236387681767936,0.689486746482929,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0.46112780877612,0.179515288819544,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,2.12029607150911,0,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,0.208843899010911,0,0,0,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0.103688191397247,0,0,0,0,1.13843818411917,0,0,0,1.30588809870604,0,0,0,0,0,0.0969890164884194,2.11814704059601,0,0.137041924646751,0.19871461170299,0,0.977756913674015,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.343609788497747,0,0,0.124252535565433,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,3.3758161177654,2.47570985875021,1.66176135211674,0,0,0.0607495566580247,0,0,0.157363764404994,0.105600336519406,0,1.15149118391667,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,7.49335849291011,8.26049863081703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,1.79052119825112,0.107824811396682,0,0.54604819096007,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0.196295437002051,0.589848616738702,0,0.346576998451015,0.762764190934334,0,0,0,0.20170506870352,0,1.57144016688853,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31828584638726,6.62576124598314,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0.447421727191169,1.07965256976767,0.121917924982269,0,0,0,0,3.04121302500737,4.77481860387284,0.356760272332706,0.67767649223376,0.219881033490858,1.35866559210006,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0.458729283404541,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0.380095503034311,2.95767606251747,0.26721740526556,1.37842349302267,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0.976839223331694,0.213454691755431,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.328402357799783,0.157421562627358,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.609868530647977,1.45782745153634,1.16193942869518,0.725627385107593,3.02785021050754,3.6497735907583,0,0,0,0,0,0.591534000199219,0.505754070234305,0.241011029883482,0.55146986366197,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0.501689773854853,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0.766021480529467,0.211673582723883,0,0,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0.781552381608161,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0.16480387422676,0.211125408127993,0,0,1.0077309914171,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,1.04171104434093,0,0,0,0.762760950878299,0.236387681767936,0.689486746482929,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0.46112780877612,0.179515288819544,0.217294743844016,0.31900115973192,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,2.12029607150911,0,0,0.0884575645033392,0,0.296521128680622,0.494255755786011,0.208843899010911,0,0,0,0,0,0,0,0,0.61214552326098,0,0.150323419414493,0.103688191397247,0,0,0,0,1.13843818411917,0,0,0,1.30588809870604,0,0,0,0,0,0.0969890164884194,2.11814704059601,0,0.137041924646751,0.19871461170299,0,0.977756913674015,0.0801588202515337,0,0.19980960958213,0.144090417154106,0.343609788497747,0,0,0.124252535565433,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,3.3758161177654,2.47570985875021,1.66176135211674,0,0,0.0607495566580247,0,0,0.157363764404994,0.105600336519406,0,1.15149118391667,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,7.49335849291011,8.26049863081703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.358177682162975,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,1.79052119825112,0.107824811396682,0,0.54604819096007,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0,0,0,0,0.504143392443436,0,0,0,0.196295437002051,0.589848616738702,0,0.346576998451015,0.762764190934334,0,0,0,0.20170506870352,0,1.57144016688853,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31828584638726,6.62576124598314,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0,0,0.447421727191169,1.07965256976767,0.121917924982269,0,0,0,0,3.04121302500737,4.77481860387284,0.356760272332706,0.67767649223376,0.219881033490858,1.35866559210006,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0.458729283404541,0,0,0,0.436350690340377,0,0.371995018166751,0,0,0,0,0.380095503034311,2.95767606251747,0.26721740526556,1.37842349302267,0.50141507858475,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0.976839223331694,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p5@LOXL3 | |short_description=p5@LOXL3 | ||
}} | }} |
Latest revision as of 11:58, 18 September 2015
Short description: | p5@LOXL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOXL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_ENST00000420535_5end |
EntrezGene: | LOXL3 |
HGNC: | 13869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 9.52e-14 | 2 |
epithelial cell of cervix | 2.62e-12 | 2 |
embryonic stem cell | 3.50e-11 | 5 |
neuron | 1.15e-09 | 6 |
neuroblast | 1.15e-09 | 6 |
electrically signaling cell | 1.15e-09 | 6 |
neural cell | 1.09e-07 | 25 |
neuronal stem cell | 2.34e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 2.62e-12 | 2 |
cervix epithelium | 2.62e-12 | 2 |
uterine cervix | 2.60e-09 | 6 |
neck of organ | 2.60e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.47e-11 | 5 |
cell type cancer | 8.28e-11 | 143 |
carcinoma | 9.36e-11 | 106 |
cancer | 1.49e-07 | 235 |
chondrosarcoma | 2.52e-07 | 1 |
extraosseous chondrosarcoma | 2.52e-07 | 1 |
myxoid chondrosarcoma | 2.52e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.52e-07 | 1 |
disease of cellular proliferation | 2.65e-07 | 239 |
islet cell tumor | 3.21e-07 | 1 |
endocrine pancreas cancer | 3.21e-07 | 1 |
pancreatic endocrine carcinoma | 3.21e-07 | 1 |