FFCP PHASE1:Hg19::chr5:68788394..68788432,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=100506658 | |EntrezGene=100506658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=8104 | |HGNC=8104 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=A8K3T2,Q16625 | |UniProt=A8K3T2,Q16625 | ||
|association_with_transcript=-157bp_to_NM_001205254_5end | |association_with_transcript=-157bp_to_NM_001205254_5end | ||
|cluster_id=chr5:68788394..68788432,+ | |||
|coexpression_cluster_id=C4514 | |coexpression_cluster_id=C4514 | ||
|description=CAGE_peak_3_at_OCLN_5end | |description=CAGE_peak_3_at_OCLN_5end |
Latest revision as of 13:16, 18 September 2015
Short description: | p3@OCLN |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OCLN_5end |
Coexpression cluster: | C4514_nasal_immature_Prostate_cervical_amniotic_Intestinal_colon |
Association with transcript: | -157bp_to_NM_001205254_5end |
EntrezGene: | OCLN |
HGNC: | 8104 |
UniProt: | A8K3T2Q16625 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@OCLN |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.20e-16 | 253 |
endodermal cell | 7.15e-14 | 58 |
endo-epithelial cell | 8.02e-13 | 42 |
germ line cell | 5.58e-08 | 7 |
germ cell | 5.58e-08 | 7 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 8.25e-21 | 160 |
endoderm | 8.25e-21 | 160 |
presumptive endoderm | 8.25e-21 | 160 |
digestive system | 1.67e-19 | 145 |
digestive tract | 1.67e-19 | 145 |
primitive gut | 1.67e-19 | 145 |
subdivision of digestive tract | 2.02e-19 | 118 |
endo-epithelium | 2.09e-11 | 82 |
gastrointestinal system | 2.54e-10 | 25 |
intestine | 3.35e-10 | 17 |
Showing 1 to 10 of 17 entries
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.48e-22 | 106 |
cell type cancer | 4.57e-17 | 143 |
adenocarcinoma | 2.16e-13 | 25 |
squamous cell carcinoma | 2.68e-10 | 14 |
Showing 1 to 4 of 4 entries