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FFCP PHASE1:Hg19::chr5:68788394..68788432,+: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=100506658
|EntrezGene=100506658
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=8104
|HGNC=8104
|TSSclassifier=W
|TSSclassifier=strong
|UniProt=A8K3T2,Q16625
|UniProt=A8K3T2,Q16625
|association_with_transcript=-157bp_to_NM_001205254_5end
|association_with_transcript=-157bp_to_NM_001205254_5end
|cluster_id=chr5:68788394..68788432,+
|coexpression_cluster_id=C4514
|coexpression_cluster_id=C4514
|description=CAGE_peak_3_at_OCLN_5end
|description=CAGE_peak_3_at_OCLN_5end

Latest revision as of 13:16, 18 September 2015

Short description:p3@OCLN
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_OCLN_5end
Coexpression cluster:C4514_nasal_immature_Prostate_cervical_amniotic_Intestinal_colon
Association with transcript: -157bp_to_NM_001205254_5end
EntrezGene:OCLN
HGNC: 8104
UniProt: A8K3T2Q16625
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data