FFCP PHASE1:Hg19::chr6:36725157..36725188,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:36725157..36725188,-
|short_description=p2@CPNE5
|description=CAGE_peak_2_at_CPNE5_5end
|association_with_transcript=0bp_to_ENST00000393189,ENST00000459703...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57699 | |EntrezGene=57699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2318 | |HGNC=2318 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z6C8 | |UniProt=Q7Z6C8 | ||
|association_with_transcript=0bp_to_ENST00000393189,ENST00000459703,ENST00000493411,uc003omp.1,uc003omq.1,uc010jwn.1_5end | |||
|cluster_id=chr6:36725157..36725188,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_2_at_CPNE5_5end | |||
|id=chr6:36725157..36725188,- | |||
|ontology_enrichment_celltype=CL:0000738!1.02e-41!140;CL:0002087!1.74e-41!119;CL:0002031!2.24e-36!124;CL:0000037!1.83e-29!172;CL:0000566!1.83e-29!172;CL:0000542!4.39e-29!53;CL:0000051!4.39e-29!53;CL:0000838!4.94e-28!52;CL:0000945!3.72e-27!24;CL:0000826!3.72e-27!24;CL:0002032!1.31e-26!165;CL:0000837!1.31e-26!165;CL:0000988!2.64e-26!182;CL:0002057!9.04e-18!42;CL:0000860!5.76e-17!45;CL:0000236!5.30e-16!14;CL:0002009!8.24e-13!65;CL:0000766!5.86e-12!76;CL:0002194!8.75e-12!63;CL:0000576!8.75e-12!63;CL:0000040!8.75e-12!63;CL:0000559!8.75e-12!63;CL:0000557!1.43e-11!71;CL:0000839!2.55e-10!70;CL:0000791!4.38e-07!18;CL:0000789!4.38e-07!18;CL:0002420!4.38e-07!18;CL:0002419!4.38e-07!18;CL:0000790!4.38e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000945;9.82e-43;24!CL:0000236;1.29e-24;13!CL:0000542;1.02e-15;53!CL:0000860;7.78e-14;33!CL:0002057;7.78e-14;33!CL:0002087;6.11e-13;104!CL:0000473;9.71e-09;39!CL:0000234;9.71e-09;39!CL:0000738;3.02e-08;136!CL:0000226;4.04e-07;3!CL:0000842;4.04e-07;3!CL:0000576;6.88e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-42,24;CL:0000826,1.09e-42,24;CL:0002087,1.21e-35,115;CL:0000738,2.32e-33,136;CL:0002031,2.81e-27,120;CL:0000236,1.68e-26,14;CL:0000542,1.64e-25,53;CL:0000051,1.64e-25,53;CL:0000037,4.57e-24,168;CL:0000838,4.58e-24,52;CL:0000988,4.53e-22,177;CL:0002032,4.34e-21,161;CL:0000837,4.34e-21,161;CL:0000860,4.90e-12,42;CL:0002057,4.90e-12,42;CL:0000473,6.15e-10,48;CL:0000234,6.15e-10,48;CL:0000766,4.14e-09,72;CL:0002194,5.16e-09,59;CL:0000576,5.16e-09,59;CL:0000040,5.16e-09,59;CL:0000559,5.16e-09,59;CL:0002009,1.46e-08,61;CL:0000839,1.48e-07,66;CL:0000557,2.26e-07,67;CL:0000226,4.05e-07,3;CL:0000842,4.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.02e-15;53!CL:0002057;1.03e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.44e-20!112;UBERON:0002390!9.10e-20!102;UBERON:0003061!9.10e-20!102;UBERON:0007023!2.97e-12!115;UBERON:0000178!2.11e-11!15;UBERON:0000179!2.11e-11!15;UBERON:0000463!2.11e-11!15;UBERON:0002405!7.07e-10!115;UBERON:0002371!1.01e-09!80;UBERON:0001474!2.42e-08!86;UBERON:0003081!1.14e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.08e-19;15!UBERON:0000179;3.08e-19;15!UBERON:0000463;3.08e-19;15!UBERON:0002390;1.44e-12;32!UBERON:0002193;7.41e-09;42!UBERON:0004177;5.81e-07;5!UBERON:0005057;5.81e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.07e-19,15;UBERON:0000179,3.07e-19,15;UBERON:0000463,3.07e-19,15;UBERON:0002390,2.57e-18,98;UBERON:0003061,2.57e-18,98;UBERON:0002193,3.23e-18,108;UBERON:0007023,5.51e-11,114;UBERON:0002405,2.19e-08,93 | |||
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| ||
|short_description=p2@CPNE5 | |||
}} | }} |
Latest revision as of 13:20, 18 September 2015
Short description: | p2@CPNE5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CPNE5_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 0bp_to_ENST00000393189, ENST00000459703, ENST00000493411, uc003omp.1, uc003omq.1, uc010jwn.1_5end |
EntrezGene: | CPNE5 |
HGNC: | 2318 |
UniProt: | Q7Z6C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.09e-42 | 24 |
pro-B cell | 1.09e-42 | 24 |
nongranular leukocyte | 1.21e-35 | 115 |
leukocyte | 2.32e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 2.81e-27 | 120 |
B cell | 1.68e-26 | 14 |
lymphocyte | 1.64e-25 | 53 |
common lymphoid progenitor | 1.64e-25 | 53 |
hematopoietic stem cell | 4.57e-24 | 168 |
lymphoid lineage restricted progenitor cell | 4.58e-24 | 52 |
hematopoietic cell | 4.53e-22 | 177 |
hematopoietic oligopotent progenitor cell | 4.34e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.34e-21 | 161 |
classical monocyte | 4.90e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.90e-12 | 42 |
defensive cell | 6.15e-10 | 48 |
phagocyte | 6.15e-10 | 48 |
myeloid leukocyte | 4.14e-09 | 72 |
monopoietic cell | 5.16e-09 | 59 |
monocyte | 5.16e-09 | 59 |
monoblast | 5.16e-09 | 59 |
promonocyte | 5.16e-09 | 59 |
macrophage dendritic cell progenitor | 1.46e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.48e-07 | 66 |
granulocyte monocyte progenitor cell | 2.26e-07 | 67 |
single nucleate cell | 4.05e-07 | 3 |
mononuclear cell | 4.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.07e-19 | 15 |
haemolymphatic fluid | 3.07e-19 | 15 |
organism substance | 3.07e-19 | 15 |
hematopoietic system | 2.57e-18 | 98 |
blood island | 2.57e-18 | 98 |
hemolymphoid system | 3.23e-18 | 108 |
adult organism | 5.51e-11 | 114 |
immune system | 2.19e-08 | 93 |