FFCP PHASE1:Hg19::chr4:74301931..74301947,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=174 | |EntrezGene=174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=317 | |HGNC=317 | ||
|TSSclassifier=strong | |||
|UniProt=P02771 | |UniProt=P02771 | ||
|association_with_transcript=0bp_to_NM_001134,uc003hgz.1,uc003hha.1_5end | |association_with_transcript=0bp_to_NM_001134,uc003hgz.1,uc003hha.1_5end | ||
|cluster_id=chr4:74301931..74301947,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_1_at_AFP_5end | |description=CAGE_peak_1_at_AFP_5end | ||
|id=chr4:74301931..74301947,+ | |id=chr4:74301931..74301947,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.58e-19!5;CL:0000181!2.59e-08!12;CL:0000417!2.59e-08!12;CL:0000668!2.59e-08!12;CL:0000414!2.59e-08!12;CL:0000412!2.59e-08!12;CL:0000182!2.59e-08!12 | |ontology_enrichment_celltype=CL:0002322!1.58e-19!5;CL:0000181!2.59e-08!12;CL:0000417!2.59e-08!12;CL:0000668!2.59e-08!12;CL:0000414!2.59e-08!12;CL:0000412!2.59e-08!12;CL:0000182!2.59e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.52e-17;5!CL:0000182;1.06e-12;12!CL:0002563;2.62e-10;4!CL:0000148;7.33e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.62e-17,5;CL:0000182,1.06e-12,12;CL:0002563,2.62e-10,4;CL:0000148,7.43e-09,10;CL:0000541,7.43e-09,10;CL:0000223,3.83e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.87e-21;11!UBERON:0009497;7.09e-18;13!UBERON:0003104;5.00e-14;31!UBERON:0001041;1.17e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.50e-09!35;UBERON:0005057!1.11e-08!26;UBERON:0002081!1.37e-08!2;UBERON:0004921!3.61e-08!129;UBERON:0004185!3.61e-08!129;UBERON:0000160!1.12e-07!27;UBERON:0005172!1.23e-07!55;UBERON:0005173!1.23e-07!55;UBERON:0002107!3.69e-07!19;UBERON:0006925!3.69e-07!19;UBERON:0008836!3.69e-07!19;UBERON:0001007!8.88e-07!155;UBERON:0001555!8.88e-07!155;UBERON:0007026!8.88e-07!155;UBERON:0003929!9.62e-07!54 | |ontology_enrichment_uberon=UBERON:0005409!6.50e-09!35;UBERON:0005057!1.11e-08!26;UBERON:0002081!1.37e-08!2;UBERON:0004921!3.61e-08!129;UBERON:0004185!3.61e-08!129;UBERON:0000160!1.12e-07!27;UBERON:0005172!1.23e-07!55;UBERON:0005173!1.23e-07!55;UBERON:0002107!3.69e-07!19;UBERON:0006925!3.69e-07!19;UBERON:0008836!3.69e-07!19;UBERON:0001007!8.88e-07!155;UBERON:0001555!8.88e-07!155;UBERON:0007026!8.88e-07!155;UBERON:0003929!9.62e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.55e-20;49!UBERON:0000160;8.69e-18;17!UBERON:0005409;7.80e-14;22!UBERON:0002107;3.41e-12;19!UBERON:0006925;3.41e-12;19!UBERON:0001242;2.62e-10;4!UBERON:0001262;2.62e-10;4!UBERON:0004786;2.62e-10;4!UBERON:0004808;2.62e-10;4!UBERON:0001277;2.62e-10;4!UBERON:0007029;4.53e-10;1!UBERON:0001052;5.84e-10;4!UBERON:0002423;3.15e-09;25!UBERON:0004921;4.81e-09;33!UBERON:0002368;8.07e-09;33!UBERON:0002108;2.99e-08;4!UBERON:0004907;3.85e-08;5!UBERON:0004177;5.32e-08;5!UBERON:0005057;5.32e-08;5!UBERON:0000059;6.71e-08;11!UBERON:0001007;1.63e-07;81!UBERON:0002365;6.65e-07;31!UBERON:0002330;6.65e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.44e-18,17;UBERON:0005409,2.14e-16,25;UBERON:0004921,9.22e-15,118;UBERON:0003929,1.27e-12,54;UBERON:0002107,3.41e-12,19;UBERON:0006925,3.41e-12,19;UBERON:0008836,3.41e-12,19;UBERON:0001007,1.45e-11,145;UBERON:0001555,1.45e-11,145;UBERON:0007026,1.45e-11,145;UBERON:0008835,1.64e-10,22;UBERON:0003894,1.64e-10,22;UBERON:0001242,2.62e-10,4;UBERON:0001262,2.62e-10,4;UBERON:0004786,2.62e-10,4;UBERON:0004808,2.62e-10,4;UBERON:0001277,2.62e-10,4;UBERON:0004119,2.98e-10,160;UBERON:0000925,2.98e-10,160;UBERON:0006595,2.98e-10,160;UBERON:0007029,4.75e-10,1;UBERON:0009854,4.79e-10,23;UBERON:0001052,5.71e-10,4;UBERON:0007499,3.15e-09,25;UBERON:0009497,3.15e-09,25;UBERON:0000015,3.15e-09,25;UBERON:0002423,3.15e-09,25;UBERON:0006235,3.15e-09,25;UBERON:0004161,3.15e-09,25;UBERON:0002368,4.49e-09,35;UBERON:0009856,7.24e-09,26;UBERON:0011216,8.59e-09,223;UBERON:0002108,2.94e-08,4;UBERON:0004907,3.78e-08,5;UBERON:0000059,6.63e-08,11;UBERON:0005911,7.10e-08,82;UBERON:0005172,1.22e-07,54;UBERON:0005173,1.22e-07,54;UBERON:0002365,2.10e-07,31;UBERON:0002330,2.10e-07,31;UBERON:0000949,5.97e-07,45;UBERON:0002530,6.04e-07,59;UBERON:0002417,8.45e-07,60;UBERON:0000916,8.45e-07,60 | |||
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| ||
|short_description=p1@AFP | |short_description=p1@AFP | ||
}} | }} |
Latest revision as of 13:25, 18 September 2015
Short description: | p1@AFP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AFP_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 0bp_to_NM_001134, uc003hgz.1, uc003hha.1_5end |
EntrezGene: | AFP |
HGNC: | 317 |
UniProt: | P02771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data