FFCP PHASE1:Hg19::chr12:48357340..48357397,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79022 | |EntrezGene=79022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28775 | |HGNC=28775 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BVX2,F8VZW0,F8W120,F8W098,C9JUY7 | |UniProt=Q9BVX2,F8VZW0,F8W120,F8W098,C9JUY7 | ||
|association_with_transcript=0bp_to_ENST00000256686,ENST00000546749,ENST00000548153,ENST00000549288,ENST00000550146,ENST00000550552,ENST00000551305,ENST00000552187,ENST00000552546,ENST00000552561_5end | |association_with_transcript=0bp_to_ENST00000256686,ENST00000546749,ENST00000548153,ENST00000549288,ENST00000550146,ENST00000550552,ENST00000551305,ENST00000552187,ENST00000552546,ENST00000552561_5end | ||
|cluster_id=chr12:48357340..48357397,+ | |||
|description=CAGE_peak_1_at_TMEM106C_5end | |description=CAGE_peak_1_at_TMEM106C_5end | ||
|id=chr12:48357340..48357397,+ | |id=chr12:48357340..48357397,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.24e-17!254 | |ontology_enrichment_celltype=CL:0000066!2.24e-17!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.90e-18,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.68e-07;29 | |||
|ontology_enrichment_disease=DOID:14566!6.48e-38!239;DOID:162!2.70e-37!235;DOID:0050687!3.00e-24!143;DOID:305!3.37e-20!106;DOID:0050686!1.94e-18!137;DOID:7!2.81e-07!39;DOID:299!4.36e-07!25;DOID:2531!5.11e-07!51;DOID:0060083!5.11e-07!51 | |ontology_enrichment_disease=DOID:14566!6.48e-38!239;DOID:162!2.70e-37!235;DOID:0050687!3.00e-24!143;DOID:305!3.37e-20!106;DOID:0050686!1.94e-18!137;DOID:7!2.81e-07!39;DOID:299!4.36e-07!25;DOID:2531!5.11e-07!51;DOID:0060083!5.11e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:299;4.46e-07;25!DOID:305;5.77e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.47e-38,239;DOID:162,2.70e-37,235;DOID:0050687,3.00e-24,143;DOID:305,3.37e-20,106;DOID:0050686,1.94e-18,137;DOID:7,2.81e-07,39;DOID:299,4.36e-07,25;DOID:2531,5.11e-07,51;DOID:0060083,5.11e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0008947!1.20e-07!38;UBERON:0003258!1.20e-07!38;UBERON:0001737!1.30e-07!9;UBERON:0001007!2.16e-07!155;UBERON:0001555!2.16e-07!155;UBERON:0007026!2.16e-07!155;UBERON:0004921!5.04e-07!129;UBERON:0004185!5.04e-07!129;UBERON:0000072!6.62e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.29e-07;9!UBERON:0001557;1.29e-07;9!UBERON:0000072;5.17e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008947,1.20e-07,38;UBERON:0003258,1.20e-07,38;UBERON:0001737,1.30e-07,9 | |||
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| ||
|short_description=p1@TMEM106C | |short_description=p1@TMEM106C | ||
}} | }} |
Latest revision as of 13:32, 18 September 2015
Short description: | p1@TMEM106C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM106C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256686, ENST00000546749, ENST00000548153, ENST00000549288, ENST00000550146, ENST00000550552, ENST00000551305, ENST00000552187, ENST00000552546, ENST00000552561_5end |
EntrezGene: | TMEM106C |
HGNC: | 28775 |
UniProt: | Q9BVX2F8VZW0F8W120F8W098C9JUY7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.90e-18 | 253 |
Ontology term | p-value | n |
---|---|---|
respiratory primordium | 1.20e-07 | 38 |
endoderm of foregut | 1.20e-07 | 38 |
larynx | 1.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.47e-38 | 239 |
cancer | 2.70e-37 | 235 |
cell type cancer | 3.00e-24 | 143 |
carcinoma | 3.37e-20 | 106 |
organ system cancer | 1.94e-18 | 137 |
disease of anatomical entity | 2.81e-07 | 39 |
adenocarcinoma | 4.36e-07 | 25 |
hematologic cancer | 5.11e-07 | 51 |
immune system cancer | 5.11e-07 | 51 |