FFCP PHASE1:Hg19::chr11:60233576..60233586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=931 | |EntrezGene=931 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7315 | |HGNC=7315 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=343bp_to_ENST00000532418_5end | |association_with_transcript=343bp_to_ENST00000532418_5end | ||
|cluster_id=chr11:60233576..60233586,+ | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_4_at_MS4A1_5end | |description=CAGE_peak_4_at_MS4A1_5end | ||
|id=chr11:60233576..60233586,+ | |id=chr11:60233576..60233586,+ | ||
|ontology_enrichment_celltype=CL:0000236;2.16e-89;13!CL:0000945;9.33e-81;24!CL:0000542;5.36e-25;53!CL:0000946;8.64e-13;1!CL:0000786;8.64e-13;1 | |ontology_enrichment_celltype=CL:0000945!7.23e-87!24;CL:0000826!7.23e-87!24;CL:0000542!3.14e-44!53;CL:0000051!3.14e-44!53;CL:0000236!2.73e-42!14;CL:0000838!3.86e-41!52;CL:0002087!8.42e-22!119;CL:0000738!1.14e-17!140;CL:0002031!3.29e-17!124;CL:0000037!2.59e-13!172;CL:0000566!2.59e-13!172;CL:0002032!7.54e-13!165;CL:0000837!7.54e-13!165;CL:0000988!2.88e-12!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000236;2.16e-89;13!CL:0000945;9.33e-81;24!CL:0000542;5.36e-25;53!CL:0000946;8.64e-13;1!CL:0000786;8.64e-13;1 | ||
|ontology_enrichment_disease=DOID:4960;8.64e-13;1!DOID:0070004;8.64e-13;1 | |ontology_enrichment_celltype_v019_2=CL:0000236,4.25e-100,14;CL:0000945,9.67e-81,24;CL:0000826,9.67e-81,24;CL:0000838,1.77e-36,52;CL:0000542,9.24e-36,53;CL:0000051,9.24e-36,53;CL:0002087,1.91e-15,115;CL:0002031,9.79e-15,120;CL:0000946,6.82e-13,1;CL:0000786,6.82e-13,1;CL:0000980,6.82e-13,1;CL:0000738,8.25e-13,136;CL:0002032,1.48e-10,161;CL:0000837,1.48e-10,161;CL:0000037,4.80e-10,168;CL:0000988,1.91e-09,177;CL:0000785,4.42e-07,2;CL:0000955,4.42e-07,2;CL:0000818,4.42e-07,2;CL:0000954,4.42e-07,2;CL:0000816,4.42e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0002106;3.25e-16;3!UBERON:0001154;3.99e-13;1!UBERON:0001153;3.99e-13;1!UBERON:0009854;3.99e-13;1!UBERON:0004177;4.12e-10;5!UBERON:0005057;4.12e-10;5 | |ontology_enrichment_development_v019=CL:0000051;5.36e-25;53!UBERON:0004872;2.62e-15;7!UBERON:0001045;3.99e-13;1!CL:0000954;4.98e-07;2!UBERON:0006965;4.98e-07;2 | ||
|ontology_enrichment_disease=DOID:0060058!7.93e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:4960;8.64e-13;1!DOID:0070004;8.64e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.09e-12,1;DOID:0070004,1.09e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!8.70e-17!7;UBERON:0002106!4.27e-15!3;UBERON:0004854!4.27e-15!3;UBERON:0009034!4.27e-15!3;UBERON:0002095!4.27e-15!3;UBERON:0004782!4.27e-15!3;UBERON:0003281!4.27e-15!3;UBERON:0009664!4.27e-15!3;UBERON:0002296!4.27e-15!3;UBERON:0005602!4.27e-15!3;UBERON:0001179!4.27e-15!3;UBERON:0006293!4.27e-15!3;UBERON:0001042!1.48e-07!10;UBERON:0009145!1.48e-07!10;UBERON:0006562!7.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;3.25e-16;3!UBERON:0001154;3.99e-13;1!UBERON:0001153;3.99e-13;1!UBERON:0009854;3.99e-13;1!UBERON:0004177;4.12e-10;5!UBERON:0005057;4.12e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.52e-16,3;UBERON:0004854,3.52e-16,3;UBERON:0009034,3.52e-16,3;UBERON:0002095,3.52e-16,3;UBERON:0004782,3.52e-16,3;UBERON:0003281,3.52e-16,3;UBERON:0009664,3.52e-16,3;UBERON:0002296,3.52e-16,3;UBERON:0005602,3.52e-16,3;UBERON:0001179,3.52e-16,3;UBERON:0006293,3.52e-16,3;UBERON:0001154,3.76e-13,1;UBERON:0001153,3.76e-13,1;UBERON:0001045,3.76e-13,1;UBERON:0004177,1.86e-07,7;UBERON:0005057,1.86e-07,7 | |||
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|short_description=p4@MS4A1 | |short_description=p4@MS4A1 | ||
}} | }} |
Latest revision as of 13:41, 18 September 2015
Short description: | p4@MS4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MS4A1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 343bp_to_ENST00000532418_5end |
EntrezGene: | MS4A1 |
HGNC: | 7315 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.25e-100 | 14 |
lymphocyte of B lineage | 9.67e-81 | 24 |
pro-B cell | 9.67e-81 | 24 |
lymphoid lineage restricted progenitor cell | 1.77e-36 | 52 |
lymphocyte | 9.24e-36 | 53 |
common lymphoid progenitor | 9.24e-36 | 53 |
nongranular leukocyte | 1.91e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 9.79e-15 | 120 |
antibody secreting cell | 6.82e-13 | 1 |
plasma cell | 6.82e-13 | 1 |
plasmablast | 6.82e-13 | 1 |
leukocyte | 8.25e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.48e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-10 | 161 |
hematopoietic stem cell | 4.80e-10 | 168 |
hematopoietic cell | 1.91e-09 | 177 |
mature B cell | 4.42e-07 | 2 |
pre-B-II cell | 4.42e-07 | 2 |
transitional stage B cell | 4.42e-07 | 2 |
small pre-B-II cell | 4.42e-07 | 2 |
immature B cell | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.52e-16 | 3 |
gastrointestinal system mesentery | 3.52e-16 | 3 |
stomach region | 3.52e-16 | 3 |
mesentery | 3.52e-16 | 3 |
gastrointestinal system serosa | 3.52e-16 | 3 |
mesentery of stomach | 3.52e-16 | 3 |
gut mesentery | 3.52e-16 | 3 |
dorsal mesentery | 3.52e-16 | 3 |
dorsal mesogastrium | 3.52e-16 | 3 |
peritoneal cavity | 3.52e-16 | 3 |
spleen primordium | 3.52e-16 | 3 |
vermiform appendix | 3.76e-13 | 1 |
caecum | 3.76e-13 | 1 |
midgut | 3.76e-13 | 1 |
hemopoietic organ | 1.86e-07 | 7 |
immune organ | 1.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.09e-12 | 1 |
myeloma | 1.09e-12 | 1 |