FFCP PHASE1:Hg19::chr3:48475304..48475315,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:48475304..48475315,- to FFCP PHASE1:Hg19::chr3:48475304..48475315,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79714 | |EntrezGene=79714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25714 | |HGNC=25714 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=48bp_to_BC004341_5end | |||
|cluster_id=chr3:48475304..48475315,- | |||
|description=CAGE_peak_5_at_CCDC51_5end | |||
|id=chr3:48475304..48475315,- | |||
|ontology_enrichment_celltype=CL:0002251!4.43e-11!21;CL:0000066!2.19e-09!254;CL:0002076!3.01e-09!43;CL:0000223!3.48e-09!59;CL:0000154!9.99e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.85e-22;3!CL:0000349;6.33e-13;19!CL:0000135;5.17e-10;3!CL:0002541;5.17e-10;3!CL:0000388;5.17e-10;3!CL:0002581;1.05e-08;1!CL:0002616;1.36e-08;1!CL:0000313;1.36e-08;1!CL:0000511;3.96e-08;1!CL:0002625;3.96e-08;1!CL:0000216;3.96e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.61e-22,3;CL:0000349,5.64e-13,19;CL:0002541,4.12e-10,3;CL:0000135,4.31e-10,3;CL:0000388,4.31e-10,3;CL:0002581,1.05e-08,1;CL:0002616,1.41e-08,1;CL:0000313,1.52e-08,1;CL:0000511,2.89e-08,1;CL:0002625,2.89e-08,1;CL:0000216,2.89e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.36e-08;1!DOID:1799;3.96e-08;1!DOID:10165;3.96e-08;1!DOID:178;3.96e-08;1!DOID:326;3.96e-08;1!DOID:3978;3.96e-08;1!DOID:3394;3.96e-08;1!DOID:5844;3.96e-08;1!DOID:1798;3.96e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.52e-08,1;DOID:178,3.33e-08,1;DOID:326,3.33e-08,1;DOID:3978,3.33e-08,1;DOID:3394,3.33e-08,1;DOID:5844,3.33e-08,1;DOID:1799,5.07e-08,1;DOID:10165,5.07e-08,1;DOID:1798,5.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004923!1.32e-13!57;UBERON:0005631!1.41e-11!14;UBERON:0000158!1.41e-11!14;UBERON:0003124!2.38e-09!7;UBERON:0004119!1.27e-07!169;UBERON:0000925!1.27e-07!169;UBERON:0006595!1.27e-07!169;UBERON:0000478!2.19e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;5.41e-17;4!UBERON:0005406;1.38e-15;2!UBERON:0004909;5.13e-15;2!UBERON:0000478;4.03e-10;24!UBERON:0007846;5.17e-10;3!UBERON:0000043;5.17e-10;3!UBERON:0007845;5.17e-10;3!UBERON:0003124;5.17e-10;3!UBERON:0000920;5.17e-10;3!UBERON:0004911;1.36e-08;1!UBERON:0001136;3.96e-08;1!UBERON:0001343;3.96e-08;1!UBERON:0004910;3.96e-08;1!UBERON:0004813;3.96e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,2.80e-25,7;UBERON:0001987,4.88e-17,4;UBERON:0004340,4.88e-17,4;UBERON:0005406,1.43e-15,2;UBERON:0004909,4.16e-15,2;UBERON:0005631,1.46e-12,14;UBERON:0000158,1.46e-12,14;UBERON:0000478,3.68e-10,24;UBERON:0000920,4.12e-10,3;UBERON:0007846,4.31e-10,3;UBERON:0000043,4.31e-10,3;UBERON:0007845,4.31e-10,3;UBERON:0004911,1.52e-08,1;UBERON:0001136,2.89e-08,1;UBERON:0001343,2.89e-08,1;UBERON:0004910,2.89e-08,1;UBERON:0005154,2.89e-08,1;UBERON:0005295,2.89e-08,1;UBERON:0004813,2.89e-08,1;UBERON:0005297,2.89e-08,1;UBERON:0005294,2.89e-08,1;UBERON:0010141,2.89e-08,1;UBERON:0005891,2.89e-08,1 | |||
|phase1_expression=1.45342703416445,0.428201047781966,1.12763523276777,0,0.446961094427288,3.48935409640147,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0.289693037921647,0,0.973269740605272,0.283604451492204,0,0.43917392846563,0,0.364295288292542,4.07862887062872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0,0.397227542439656,0.286836620748814,0.354668382198357,1.12135520028461,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0.276149695926898,0,0,0,0.169560592310488,0.386521706326594,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.343135620597051,0.219500570817251,0,0,0.833296006426766,0,0,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29723871668228,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.468565659970853,0.300946099727719,0,0,0,0.184369168541703,0,0,0.686286847621712,0,0,0,3.94065842880137,9.98612637062982,3.62868351995616,0.992431231275107,0,0.561320188866147,1.02511319404561,0,0.482561763430822,5.93672265779964,0,0,0.164254312027618,0,0.116210378459959,0.604297247958111,0,0,0.34444334449382,0,0.524497659837696,0,0.0770153371044148,0,0,0,0,0,0,0,0.270946437543853,1.50506932156456,0,0.831076008928724,0,0,0,0.769350375349168,0.656029291399411,0,0,0,0,0.574265537996172,0.650060246036521,1.6068392984416,0.096670718292122,0,0,0,0,0,0.170453254832202,0.0890320356467374,0.495854746082934,0.192190067365106,0,0.10115778085555,0.464845549297286,0,0,0,0,0,0,0,0,0.316379424718726,0,0.767693373934002,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0.146508179271894,0,0,0,0.71623345421307,0.296964680832639,0.614321404198464,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,2.99733075704478,0.718061155278177,1.95565269459615,1.5950057986596,0.457987967009312,1.5991043280559,0,0,0,0,0,0,0,0,0,0.163232808159148,1.27217764290547,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56203764501618,0.391969589657511,0,0,0,0,0.0730893170861856,0,0.193978032976839,0,0.225980740780532,0,0,0,0.977756913674015,0,0,0,0,0,0,0,0,2.35694034616795,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.315222829196793,0.314727528809989,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0,1.66441758450784,0,0,0,1.14420034198462,0.907385542579434,0,0,0.159296767163702,0,0,0.414706207840855,0.265841714557995,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0,0.343395705182793,0.336749488765919,0,0,0.643324774124777,0,0,0,0,0,0.617602894321944,0.438568099157414,0.530067437837643,0.192914038270915,0,0,2.41801239211839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.589848616738702,0.550285795565037,0.462102664601353,0,0,0,0.0752103283492573,0,0,1.30953347240711,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0.840816489941367,0,0,0,0.428859265059938,0.158013611732727,0,0,0,0.207216164163037,1.87790324803345,0.691259661814092,0,0,0.170426809518315,0,0,0,0,3.02009665854039,0.196300467230486,0.365753774946808,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.751871343838829,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,1.38652688589425,1.73050624849516,0,0,0,0.203977659483963,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0,0,0,0.143444410785353,0,0,0,0,0.808426818959282,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p5@CCDC51 | |||
}} | }} |
Latest revision as of 14:01, 18 September 2015
Short description: | p5@CCDC51 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC51_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_BC004341_5end |
EntrezGene: | CCDC51 |
HGNC: | 25714 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.61e-22 | 3 |
extraembryonic cell | 5.64e-13 | 19 |
chorionic membrane mesenchymal stem cell | 4.12e-10 | 3 |
fibrocyte | 4.31e-10 | 3 |
tendon cell | 4.31e-10 | 3 |
perirenal preadipocyte | 1.05e-08 | 1 |
perirenal adipocyte cell | 1.41e-08 | 1 |
serous secreting cell | 1.52e-08 | 1 |
androgen binding protein secreting cell | 2.89e-08 | 1 |
seminiferous tubule epithelial cell | 2.89e-08 | 1 |
Sertoli cell | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chorion | 2.80e-25 | 7 |
placenta | 4.88e-17 | 4 |
allantois | 4.88e-17 | 4 |
perirenal fat | 1.43e-15 | 2 |
epithelium of gonad | 4.16e-15 | 2 |
extraembryonic membrane | 1.46e-12 | 14 |
membranous layer | 1.46e-12 | 14 |
extraembryonic structure | 3.68e-10 | 24 |
egg chorion | 4.12e-10 | 3 |
dense regular connective tissue | 4.31e-10 | 3 |
tendon | 4.31e-10 | 3 |
regular connective tissue | 4.31e-10 | 3 |
epithelium of female gonad | 1.52e-08 | 1 |
mesothelium | 2.89e-08 | 1 |
seminiferous tubule of testis | 2.89e-08 | 1 |
epithelium of male gonad | 2.89e-08 | 1 |
epithelial cord | 2.89e-08 | 1 |
sex cord | 2.89e-08 | 1 |
seminiferous tubule epithelium | 2.89e-08 | 1 |
testis sex cord | 2.89e-08 | 1 |
genital ridge | 2.89e-08 | 1 |
primitive sex cord of indifferent gonad | 2.89e-08 | 1 |
coelomic epithelium | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.52e-08 | 1 |
vascular disease | 3.33e-08 | 1 |
ischemia | 3.33e-08 | 1 |
extrinsic cardiomyopathy | 3.33e-08 | 1 |
myocardial ischemia | 3.33e-08 | 1 |
myocardial infarction | 3.33e-08 | 1 |
islet cell tumor | 5.07e-08 | 1 |
endocrine pancreas cancer | 5.07e-08 | 1 |
pancreatic endocrine carcinoma | 5.07e-08 | 1 |