FFCP PHASE1:Hg19::chr8:59572532..59572546,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt=Q92636 | |UniProt=Q92636 | ||
|association_with_transcript=-128bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | |association_with_transcript=-128bp_to_NM_003580,uc003xtt.2,uc003xtu.2_5end | ||
|cluster_id=chr8:59572532..59572546,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_26_at_NSMAF_5end | |description=CAGE_peak_26_at_NSMAF_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.99e-46;7!CL:0000586;4.99e-46;7 | |ontology_enrichment_celltype_v019=CL:0000039;4.99e-46;7!CL:0000586;4.99e-46;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.99e-46,7;CL:0000586,4.99e-46,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.09e-32;10!UBERON:0005564;2.09e-32;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.09e-32;10!UBERON:0005564;2.09e-32;10 | ||
|ontology_enrichment_disease=DOID:2531!1.84e-07!51;DOID:0060083!1.84e-07!51;DOID:1240!5.86e-07!39;DOID:8692!9.59e-07!31 | |ontology_enrichment_disease=DOID:2531!1.84e-07!51;DOID:0060083!1.84e-07!51;DOID:1240!5.86e-07!39;DOID:8692!9.59e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.37e-15;22!DOID:2994;5.37e-15;22!DOID:8692;6.95e-11;31!DOID:1240;2.69e-07;39 | |ontology_enrichment_disease_v019=DOID:3095;5.37e-15;22!DOID:2994;5.37e-15;22!DOID:8692;6.95e-11;31!DOID:1240;2.69e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,5.37e-15,22;DOID:2994,5.37e-15,22;DOID:8692,1.45e-10,31;DOID:1240,1.82e-08,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.35e-40;8!UBERON:0003135;1.64e-29;11!UBERON:0007195;6.31e-21;1!UBERON:0000991;1.09e-15;21!UBERON:0003101;5.37e-15;22!UBERON:0000079;5.37e-15;22!UBERON:0002323;3.55e-07;45 | |ontology_enrichment_uberon_v019=UBERON:0000473;2.35e-40;8!UBERON:0003135;1.64e-29;11!UBERON:0007195;6.31e-21;1!UBERON:0000991;1.09e-15;21!UBERON:0003101;5.37e-15;22!UBERON:0000079;5.37e-15;22!UBERON:0002323;3.55e-07;45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.35e-40,8;UBERON:0003135,1.64e-29,11;UBERON:0007195,9.43e-21,1;UBERON:0000991,1.09e-15,21;UBERON:0009196,1.09e-15,21;UBERON:0009117,1.09e-15,21;UBERON:0005564,1.09e-15,21;UBERON:0004176,5.37e-15,22;UBERON:0003101,5.37e-15,22;UBERON:0000079,5.37e-15,22;UBERON:0002323,2.40e-07,46;UBERON:0003133,4.73e-07,48;UBERON:0004458,6.51e-07,49 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.637705090915289,0.59873811429845,0,0.211673582723883,0,0,1.82587743226554,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,2.15068535015921,1.11838053946208,0.834245708559542,0.586164286206121,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0.111308705022906,0.16480387422676,0.211125408127993,0,0,0,0.102268682502155,0.369254416383208,0,0.0898683511473268,0,1.53471711068062,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0.41827123283581,0,0,0,0,0.108647371922008,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.208843899010911,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.782982875895635,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0.713520544665411,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0.462175628631418,0,0,0,0,3.05966489225945,9.88704399482574,8.63812055627542,4.011320628678,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.215627574859517,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0.255679882248303,0.0890320356467374,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.142283686696828,0.637705090915289,0.59873811429845,0,0.211673582723883,0,0,1.82587743226554,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,2.15068535015921,1.11838053946208,0.834245708559542,0.586164286206121,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0.111308705022906,0.16480387422676,0.211125408127993,0,0,0,0.102268682502155,0.369254416383208,0,0.0898683511473268,0,1.53471711068062,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0.41827123283581,0,0,0,0,0.108647371922008,0,0,0,0,0.470940769185074,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0.208843899010911,0.134802265961354,0,0.234264445725339,0.182454789215666,0,0,0,0,0.61214552326098,0.063186579628488,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0.176512253383001,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0.782982875895635,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0.107824811396682,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0.098150233615243,0,0.647428837187895,0,0,0,0,0,0.713520544665411,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0.436350690340377,0,0,0.462175628631418,0,0,0,0,3.05966489225945,9.88704399482574,8.63812055627542,4.011320628678,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p26@NSMAF | |short_description=p26@NSMAF | ||
}} | }} |
Latest revision as of 15:51, 18 September 2015
Short description: | p26@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_NSMAF_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -128bp_to_NM_003580, uc003xtt.2, uc003xtu.2_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | Q92636 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.99e-46 | 7 |
germ cell | 4.99e-46 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.35e-40 | 8 |
male reproductive organ | 1.64e-29 | 11 |
stroma of bone marrow | 9.43e-21 | 1 |
gonad | 1.09e-15 | 21 |
indifferent external genitalia | 1.09e-15 | 21 |
indifferent gonad | 1.09e-15 | 21 |
gonad primordium | 1.09e-15 | 21 |
external genitalia | 5.37e-15 | 22 |
male organism | 5.37e-15 | 22 |
male reproductive system | 5.37e-15 | 22 |
body cavity | 2.40e-07 | 46 |
reproductive organ | 4.73e-07 | 48 |
body cavity or lining | 6.51e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.37e-15 | 22 |
germ cell cancer | 5.37e-15 | 22 |
myeloid leukemia | 1.45e-10 | 31 |
leukemia | 1.82e-08 | 39 |