FFCP PHASE1:Hg19::chr11:61197406..61197464,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79869 | |EntrezGene=79869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30098 | |HGNC=30098 | ||
|TSSclassifier=strong | |||
|UniProt=F5H669,F5H2K8,F5H6P5,F5H1W4,Q8N684,B4DGF8 | |UniProt=F5H669,F5H2K8,F5H6P5,F5H1W4,Q8N684,B4DGF8 | ||
|association_with_transcript=0bp_to_ENST00000463244,ENST00000474684,ENST00000477890,ENST00000535222,ENST00000537162,ENST00000537641,ENST00000541963,ENST00000544669,NM_001136040,NM_001142565,uc001nrq.2,uc001nrr.2,uc009ynp.2_5end | |||
|cluster_id=chr11:61197406..61197464,- | |||
|description=CAGE_peak_1_at_CPSF7_5end | |||
|id=chr11:61197406..61197464,- | |||
|ontology_enrichment_celltype=CL:0000860!3.19e-12!45;CL:0002057!2.95e-11!42;CL:0000763!1.71e-09!112;CL:0000049!1.71e-09!112;CL:0002032!3.62e-08!165;CL:0000837!3.62e-08!165;CL:0000037!4.26e-08!172;CL:0000566!4.26e-08!172;CL:0000988!5.40e-08!182;CL:0000766!8.16e-08!76;CL:0000738!7.77e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-15;33!CL:0002057;2.03e-15;33!CL:0000473;2.58e-08;39!CL:0000234;2.58e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.95e-11,42;CL:0002057,2.95e-11,42;CL:0000763,7.45e-09,108;CL:0000049,7.45e-09,108;CL:0002032,1.32e-07,161;CL:0000837,1.32e-07,161;CL:0000037,1.53e-07,168;CL:0000988,1.70e-07,177;CL:0000473,3.05e-07,48;CL:0000234,3.05e-07,48;CL:0000766,3.53e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;6.68e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.32e-07!102;UBERON:0003061!1.32e-07!102;UBERON:0002193!5.55e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.23e-07,98;UBERON:0003061,5.23e-07,98 | |||
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| ||
|short_description=p1@CPSF7 | |||
}} | }} |
Latest revision as of 16:06, 18 September 2015
Short description: | p1@CPSF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPSF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463244, ENST00000474684, ENST00000477890, ENST00000535222, ENST00000537162, ENST00000537641, ENST00000541963, ENST00000544669, NM_001136040, NM_001142565, uc001nrq.2, uc001nrr.2, uc009ynp.2_5end |
EntrezGene: | CPSF7 |
HGNC: | 30098 |
UniProt: | F5H669F5H2K8F5H6P5F5H1W4Q8N684B4DGF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.95e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.95e-11 | 42 |
myeloid cell | 7.45e-09 | 108 |
common myeloid progenitor | 7.45e-09 | 108 |
hematopoietic oligopotent progenitor cell | 1.32e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.32e-07 | 161 |
hematopoietic stem cell | 1.53e-07 | 168 |
hematopoietic cell | 1.70e-07 | 177 |
defensive cell | 3.05e-07 | 48 |
phagocyte | 3.05e-07 | 48 |
myeloid leukocyte | 3.53e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.23e-07 | 98 |
blood island | 5.23e-07 | 98 |