FFCP PHASE1:Hg19::chr7:44113711..44113734,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:44113711..44113734,- to FFCP PHASE1:Hg19::chr7:44113711..44113734,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27434 | |EntrezGene=27434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9185 | |HGNC=9185 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467607_5end | |||
|cluster_id=chr7:44113711..44113734,- | |||
|coexpression_cluster_id=C2897 | |||
|description=CAGE_peak_5_at_POLM_5end | |||
|id=chr7:44113711..44113734,- | |||
|ontology_enrichment_celltype=CL:0002057!2.92e-10!42;CL:0000860!6.55e-09!45;CL:0002139!7.43e-09!24;CL:0000766!1.26e-08!76;CL:0000548!2.40e-08!679;CL:0000004!2.40e-08!679;CL:0000255!2.40e-08!679;CL:0000071!2.58e-08!18;CL:0002546!2.58e-08!18;CL:0002368!4.36e-08!13;CL:0000012!5.06e-08!682;CL:0000063!7.24e-08!578;CL:0002371!6.95e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0002202;3.95e-10;9!CL:0002632;3.95e-10;9!CL:1000413;2.41e-09;9!CL:0000071;2.52e-09;18!CL:0002368;7.70e-09;13!CL:0002328;1.11e-08;3!CL:0000307;1.17e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,4.33e-10,9;CL:0002632,4.33e-10,9;CL:1000413,1.91e-09,9;CL:0000071,2.44e-09,18;CL:0002546,2.44e-09,18;CL:0002368,9.70e-09,13;CL:0002328,1.03e-08,3;CL:0000068,1.46e-08,3;CL:0000069,1.46e-08,3;CL:0000307,1.46e-08,3;CL:0000377,1.46e-08,3;CL:0000222,4.01e-07,121;CL:0000115,5.18e-07,36;CL:0002321,5.70e-07,250 | |||
|ontology_enrichment_development_v019=CL:0002546;2.52e-09;18!CL:0000377;1.17e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!5.24e-09!22;UBERON:0000055!2.20e-08!69;UBERON:0001986!2.58e-08!18;UBERON:0004638!2.58e-08!18;UBERON:0004852!2.58e-08!18;UBERON:0001637!8.69e-08!42;UBERON:0003509!8.69e-08!42;UBERON:0004572!8.69e-08!42;UBERON:0003081!8.83e-08!216;UBERON:0001981!9.42e-08!60;UBERON:0007500!9.42e-08!60;UBERON:0004537!9.42e-08!60;UBERON:0006965!9.42e-08!60;UBERON:0006914!3.41e-07!25;UBERON:0004573!4.44e-07!33;UBERON:0004571!4.44e-07!33;UBERON:0002049!6.35e-07!79;UBERON:0007798!6.35e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.23e-09;4!UBERON:0000490;2.37e-09;33!UBERON:0003915;2.41e-09;9!UBERON:0004700;2.41e-09;9!UBERON:0001917;2.41e-09;9!UBERON:0004638;2.52e-09;18!UBERON:0001986;2.52e-09;18!UBERON:0004852;2.52e-09;18!UBERON:0004573;3.52e-09;33!UBERON:0004571;3.52e-09;33!UBERON:0000487;5.63e-09;22!UBERON:0004815;1.11e-08;3!UBERON:0002031;1.11e-08;3!UBERON:0001637;3.56e-08;42!UBERON:0003509;3.56e-08;42!UBERON:0004572;3.56e-08;42!UBERON:0006947;9.27e-08;3!UBERON:0004054;9.27e-08;3!UBERON:0000058;9.82e-08;10!UBERON:0006914;1.19e-07;25!UBERON:0003135;5.76e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,7.65e-10,59;UBERON:0001981,7.65e-10,59;UBERON:0004537,7.65e-10,59;UBERON:0006965,7.65e-10,59;UBERON:0005904,1.02e-09,4;UBERON:0003915,1.91e-09,9;UBERON:0004700,1.91e-09,9;UBERON:0001917,1.91e-09,9;UBERON:0004638,2.44e-09,18;UBERON:0001986,2.44e-09,18;UBERON:0004852,2.44e-09,18;UBERON:0001637,2.53e-09,42;UBERON:0003509,2.53e-09,42;UBERON:0004572,2.53e-09,42;UBERON:0004573,2.56e-09,33;UBERON:0004571,2.56e-09,33;UBERON:0000487,4.93e-09,22;UBERON:0004815,1.03e-08,3;UBERON:0002031,1.03e-08,3;UBERON:0000058,2.36e-08,19;UBERON:0000490,4.67e-08,148;UBERON:0000055,6.30e-08,68;UBERON:0006947,9.92e-08,3;UBERON:0004054,9.92e-08,3;UBERON:0006914,1.07e-07,25;UBERON:0003081,2.01e-07,203;UBERON:0004872,2.99e-07,83;UBERON:0003135,5.39e-07,11;UBERON:0003914,8.33e-07,117 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0.383829398097213,0.77408061658038,3.67768489791571,4.819294700452,3.69754010166788,0,0,0,1.66198622559563,1.00272223735071,1.51907609501096,0,0,0,0.436194716338694,1.88937971844405,0.970336244751265,0.464858073811369,2.05583944010913,0.929119112685311,0,0.768482119587302,0,0,2.5819387343353,0,1.31769637679823,3.27487380069415,2.02251136000576,4.28517449319264,0.962787081228281,1.91801137739712,0.329851300186716,0.199463657621632,0.426224750532694,0.870627715885752,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.368277635987565,0,0.422510572623884,0,0.209658645508376,1.68492946719743,0.901061357049038,0.48217676009124,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.579297615531196,0,0,0,0,0,0.144846518960824,1.5905718941022,0.486634870302636,0,0.443458794925128,0,0,0.364295288292542,0.741568885568859,0,0.174129737299267,0.531831842075461,0.238490624305342,0,0,1.19257444420023,5.16140757063675,1.73570250803797,0.56530794192401,2.93649605346934,2.47606237746061,0.417989933073621,0.516833518338658,0.71153252537342,0,1.20848795132744,5.32190474002959,0,2.57364156242108,0,0.17859945656816,0.44905874525234,0.337834441449967,0,0.949265659568129,1.28241220751285,7.9068250461638,7.75560528296651,0.436094052142534,0,0.12663051166458,0,0,0.709336764396714,0,1.06748995729705,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0.161872944368132,0,0.61246251376468,0,0.929932030581889,0,0,0,0.718618141816238,0,0,1.10825646193673,0.438977620880838,0,0,0,0.358779271377724,0,0.635795703478686,0.900273288253207,0,1.54584324027377,0.558350568994769,0.843881661206331,0.389748020644795,0.252433774244115,0.0920498986422993,0,0,0.302256294682921,0.67824236924195,14.4945639872473,2.45471508531751,0.860413786167011,0,0,0,0,0,0,0,0,5.52539685409922,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0.686271241194102,0,1.1240175325762,0.100528972411631,0.370353780634118,0,0,0,0.34779121492523,0.117408694235822,0.433099343283221,0.925971025153221,0,0,0,0,0.702012795417713,0.148631162288728,0.93733833986777,0.671928512795438,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.088048434013226,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,1.71072446022705,0,0,0,0.448524337381443,0.43596006883328,0.51336800074665,0.129271715757778,0,0,0,0,0.514414748524284,0,1.5985330740966,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0.239624855491583,0,1.42636905040718,0.434343920002738,1.84928690295345,1.43248770591916,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,6.74106321552464,0,6.63064821497657,0,0,0,0.207970861530807,0.178428988797162,0,0.117141414992713,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0.206768026122887,0.647142602455851,0.213455115606889,0,0,0,0,0,0,0,0,0,0,1.07946785661859,0,0.492762936082855,1.03850885836724,0.348631135379878,0,1.60405176242628,0,0,0,0,1.35359883872224,0.231046011313244,0,0,0.105551628892876,1.13733384070897,2.2112181685947,0.215915916102139,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0,0,0,2.87132768998086,0,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0,0.165284915360978,1.15314040419064,0.765676274967505,0.30347334256665,0,0,2.0911118104818,1.84820148105653,0.532306030317022,0.869932992075073,1.66791797193528,0.715624433709956,0,0,0,0,0,0,6.27958912159384,0,0,0,0.606547444719948,3.17020642346017,1.26377536871694,0,1.21856744815642,2.11300293513511,0,0,0,0,1.32687795048244,0,0,0,0,0.6196469961995,0.563391205064483,0,0,0,1.06428319221179,0,0,0,0,4.32999507264804,2.01090682660736,5.44454924306613,0,0.43050537267123,0,0.886860307073351,2.98640420269047,0,0,0,0,0,0,0,0,0,0,0,1.85803175125719,0.577076851905779,1.13826949357463,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0.664846727600626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,4.73501283419269,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,1.39781334593624,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,1.24252535565433,2.12124631155116,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0.082092520749339,5.45241669713349,0.339936274560377,0,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0.124192805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| ||
|short_description=p5@POLM | |||
}} | }} |
Latest revision as of 16:21, 18 September 2015
Short description: | p5@POLM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_POLM_5end |
Coexpression cluster: | C2897_Gingival_Eosinophils_Tracheal_squamous_papillary_signet_Endothelial |
Association with transcript: | 0bp_to_ENST00000467607_5end |
EntrezGene: | POLM |
HGNC: | 9185 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 4.33e-10 | 9 |
epithelial cell of lower respiratory tract | 4.33e-10 | 9 |
endothelial cell of artery | 1.91e-09 | 9 |
blood vessel endothelial cell | 2.44e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.44e-09 | 18 |
respiratory epithelial cell | 9.70e-09 | 13 |
bronchial epithelial cell | 1.03e-08 | 3 |
duct epithelial cell | 1.46e-08 | 3 |
branched duct epithelial cell | 1.46e-08 | 3 |
tracheal epithelial cell | 1.46e-08 | 3 |
tracheoblast | 1.46e-08 | 3 |
mesodermal cell | 4.01e-07 | 121 |
endothelial cell | 5.18e-07 | 36 |
embryonic cell | 5.70e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 7.65e-10 | 59 |
blood vessel | 7.65e-10 | 59 |
blood vasculature | 7.65e-10 | 59 |
vascular cord | 7.65e-10 | 59 |
duct of male reproductive system | 1.02e-09 | 4 |
endothelial tube | 1.91e-09 | 9 |
arterial system endothelium | 1.91e-09 | 9 |
endothelium of artery | 1.91e-09 | 9 |
blood vessel endothelium | 2.44e-09 | 18 |
endothelium | 2.44e-09 | 18 |
cardiovascular system endothelium | 2.44e-09 | 18 |
artery | 2.53e-09 | 42 |
arterial blood vessel | 2.53e-09 | 42 |
arterial system | 2.53e-09 | 42 |
systemic artery | 2.56e-09 | 33 |
systemic arterial system | 2.56e-09 | 33 |
simple squamous epithelium | 4.93e-09 | 22 |
lower respiratory tract epithelium | 1.03e-08 | 3 |
epithelium of bronchus | 1.03e-08 | 3 |
duct | 2.36e-08 | 19 |
unilaminar epithelium | 4.67e-08 | 148 |
vessel | 6.30e-08 | 68 |
male genital duct | 9.92e-08 | 3 |
internal male genitalia | 9.92e-08 | 3 |
squamous epithelium | 1.07e-07 | 25 |
lateral plate mesoderm | 2.01e-07 | 203 |
splanchnic layer of lateral plate mesoderm | 2.99e-07 | 83 |
male reproductive organ | 5.39e-07 | 11 |
epithelial tube | 8.33e-07 | 117 |