FFCP PHASE1:Hg19::chr1:57320437..57320479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=731 | |EntrezGene=731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1352 | |HGNC=1352 | ||
|TSSclassifier=strong | |||
|UniProt=P07357 | |UniProt=P07357 | ||
|association_with_transcript=0bp_to_ENST00000361249,NM_000562,uc001cyo.2_5end | |association_with_transcript=0bp_to_ENST00000361249,NM_000562,uc001cyo.2_5end | ||
|cluster_id=chr1:57320437..57320479,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_C8A_5end | |description=CAGE_peak_1_at_C8A_5end | ||
|id=chr1:57320437..57320479,+ | |id=chr1:57320437..57320479,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.79e-22!12;CL:0000417!6.79e-22!12;CL:0000668!6.79e-22!12;CL:0000414!6.79e-22!12;CL:0000412!6.79e-22!12;CL:0000182!6.79e-22!12 | |ontology_enrichment_celltype=CL:0000181!6.79e-22!12;CL:0000417!6.79e-22!12;CL:0000668!6.79e-22!12;CL:0000414!6.79e-22!12;CL:0000412!6.79e-22!12;CL:0000182!6.79e-22!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.28e-40;12!CL:0002535;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.29e-40,12;CL:0000223,5.08e-08,58;CL:0002535,7.52e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.83e-30;11!UBERON:0009497;1.58e-25;13!UBERON:0001041;4.45e-11;30!UBERON:0003104;1.04e-10;31 | |||
|ontology_enrichment_disease=DOID:178!3.53e-08!1;DOID:326!3.53e-08!1;DOID:3978!3.53e-08!1;DOID:3394!3.53e-08!1;DOID:5844!3.53e-08!1 | |ontology_enrichment_disease=DOID:178!3.53e-08!1;DOID:326!3.53e-08!1;DOID:3978!3.53e-08!1;DOID:3394!3.53e-08!1;DOID:5844!3.53e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.56e-26!26;UBERON:0002107!5.40e-24!19;UBERON:0006925!5.40e-24!19;UBERON:0008836!5.40e-24!19;UBERON:0009497!1.63e-22!25;UBERON:0000015!1.63e-22!25;UBERON:0002423!1.63e-22!25;UBERON:0006235!1.63e-22!25;UBERON:0004161!1.63e-22!25;UBERON:0008835!1.43e-20!22;UBERON:0003894!1.43e-20!22;UBERON:0009854!1.25e-19!23;UBERON:0007499!5.72e-18!25;UBERON:0009856!3.10e-17!26;UBERON:0002368!1.17e-15!35;UBERON:0003929!2.11e-14!54;UBERON:0002365!2.85e-14!31;UBERON:0002330!2.85e-14!31;UBERON:0005172!3.81e-14!55;UBERON:0005173!3.81e-14!55;UBERON:0002417!1.46e-12!61;UBERON:0000916!1.46e-12!61;UBERON:0000949!7.31e-12!45;UBERON:0004921!1.24e-09!129;UBERON:0004185!1.24e-09!129;UBERON:0005911!8.00e-09!82;UBERON:0001007!9.63e-09!155;UBERON:0001555!9.63e-09!155;UBERON:0007026!9.63e-09!155;UBERON:0002530!1.04e-08!59;UBERON:0001301!2.13e-08!1;UBERON:0002146!3.06e-08!1;UBERON:0005623!3.06e-08!1;UBERON:0004119!8.99e-08!169;UBERON:0000925!8.99e-08!169;UBERON:0006595!8.99e-08!169 | |ontology_enrichment_uberon=UBERON:0005057!1.56e-26!26;UBERON:0002107!5.40e-24!19;UBERON:0006925!5.40e-24!19;UBERON:0008836!5.40e-24!19;UBERON:0009497!1.63e-22!25;UBERON:0000015!1.63e-22!25;UBERON:0002423!1.63e-22!25;UBERON:0006235!1.63e-22!25;UBERON:0004161!1.63e-22!25;UBERON:0008835!1.43e-20!22;UBERON:0003894!1.43e-20!22;UBERON:0009854!1.25e-19!23;UBERON:0007499!5.72e-18!25;UBERON:0009856!3.10e-17!26;UBERON:0002368!1.17e-15!35;UBERON:0003929!2.11e-14!54;UBERON:0002365!2.85e-14!31;UBERON:0002330!2.85e-14!31;UBERON:0005172!3.81e-14!55;UBERON:0005173!3.81e-14!55;UBERON:0002417!1.46e-12!61;UBERON:0000916!1.46e-12!61;UBERON:0000949!7.31e-12!45;UBERON:0004921!1.24e-09!129;UBERON:0004185!1.24e-09!129;UBERON:0005911!8.00e-09!82;UBERON:0001007!9.63e-09!155;UBERON:0001555!9.63e-09!155;UBERON:0007026!9.63e-09!155;UBERON:0002530!1.04e-08!59;UBERON:0001301!2.13e-08!1;UBERON:0002146!3.06e-08!1;UBERON:0005623!3.06e-08!1;UBERON:0004119!8.99e-08!169;UBERON:0000925!8.99e-08!169;UBERON:0006595!8.99e-08!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.26e-44;19!UBERON:0006925;3.26e-44;19!UBERON:0002423;1.81e-33;25!UBERON:0002365;7.23e-26;31!UBERON:0002330;7.23e-26;31!UBERON:0002368;8.12e-23;33!UBERON:0000949;1.04e-16;43!UBERON:0005172;4.93e-10;52!UBERON:0005173;4.93e-10;52!UBERON:0002417;7.83e-09;58!UBERON:0000916;7.83e-09;58!UBERON:0002530;1.01e-08;57!UBERON:0006955;7.52e-08;2!UBERON:0004801;7.52e-08;2!UBERON:0001007;3.61e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.26e-44,19;UBERON:0006925,3.26e-44,19;UBERON:0008836,3.26e-44,19;UBERON:0008835,4.13e-38,22;UBERON:0003894,4.13e-38,22;UBERON:0009854,1.98e-36,23;UBERON:0007499,1.81e-33,25;UBERON:0009497,1.81e-33,25;UBERON:0000015,1.81e-33,25;UBERON:0002423,1.81e-33,25;UBERON:0006235,1.81e-33,25;UBERON:0004161,1.81e-33,25;UBERON:0009856,3.69e-32,26;UBERON:0002365,7.10e-27,31;UBERON:0002330,7.10e-27,31;UBERON:0002368,9.90e-24,35;UBERON:0000949,2.62e-18,45;UBERON:0003929,3.88e-15,54;UBERON:0005172,3.88e-15,54;UBERON:0005173,3.88e-15,54;UBERON:0002530,8.59e-14,59;UBERON:0002417,1.50e-13,60;UBERON:0000916,1.50e-13,60;UBERON:0005911,1.05e-09,82;UBERON:0001041,4.21e-09,87;UBERON:0004921,4.03e-08,118;UBERON:0006955,7.52e-08,2;UBERON:0004801,7.52e-08,2;UBERON:0005177,1.00e-07,101;UBERON:0009569,6.95e-07,112 | |||
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|short_description=p1@C8A | |short_description=p1@C8A | ||
}} | }} |
Latest revision as of 16:23, 18 September 2015
Short description: | p1@C8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C8A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000361249, NM_000562, uc001cyo.2_5end |
EntrezGene: | C8A |
HGNC: | 1352 |
UniProt: | P07357 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.29e-40 | 12 |
endodermal cell | 5.08e-08 | 58 |
epithelial cell of cervix | 7.52e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 3.26e-44 | 19 |
digestive gland | 3.26e-44 | 19 |
liver bud | 3.26e-44 | 19 |
hepatic diverticulum | 4.13e-38 | 22 |
liver primordium | 4.13e-38 | 22 |
digestive tract diverticulum | 1.98e-36 | 23 |
epithelial sac | 1.81e-33 | 25 |
epithelium of foregut-midgut junction | 1.81e-33 | 25 |
anatomical boundary | 1.81e-33 | 25 |
hepatobiliary system | 1.81e-33 | 25 |
foregut-midgut junction | 1.81e-33 | 25 |
septum transversum | 1.81e-33 | 25 |
sac | 3.69e-32 | 26 |
exocrine gland | 7.10e-27 | 31 |
exocrine system | 7.10e-27 | 31 |
endocrine gland | 9.90e-24 | 35 |
endocrine system | 2.62e-18 | 45 |
gut epithelium | 3.88e-15 | 54 |
abdomen element | 3.88e-15 | 54 |
abdominal segment element | 3.88e-15 | 54 |
gland | 8.59e-14 | 59 |
abdominal segment of trunk | 1.50e-13 | 60 |
abdomen | 1.50e-13 | 60 |
endo-epithelium | 1.05e-09 | 82 |
foregut | 4.21e-09 | 87 |
subdivision of digestive tract | 4.03e-08 | 118 |
uterine epithelium | 7.52e-08 | 2 |
cervix epithelium | 7.52e-08 | 2 |
trunk region element | 1.00e-07 | 101 |
subdivision of trunk | 6.95e-07 | 112 |