FFCP PHASE2:Hg19::chr15:67358111..67358122,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4088 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6769 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6769 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P84022 | ||
|association_with_transcript=-60bp_to_ENST00000327367,ENST00000535241_5end | |association_with_transcript=-60bp_to_ENST00000327367,ENST00000535241_5end | ||
|cluster_id=chr15:67358111..67358122,+ | |cluster_id=chr15:67358111..67358122,+ |
Latest revision as of 16:57, 18 September 2015
Short description: | p6@SMAD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SMAD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENST00000327367, ENST00000535241_5end |
EntrezGene: | SMAD3 |
HGNC: | 6769 |
UniProt: | P84022 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@SMAD3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 1.35e-11 | 121 |
muscle cell | 3.14e-09 | 55 |
muscle precursor cell | 4.76e-09 | 58 |
myoblast | 4.76e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.76e-09 | 58 |
electrically responsive cell | 3.39e-07 | 61 |
electrically active cell | 3.39e-07 | 61 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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mesenchyme | 3.45e-09 | 160 |
entire embryonic mesenchyme | 3.45e-09 | 160 |
skeletal muscle tissue | 6.35e-09 | 62 |
striated muscle tissue | 6.35e-09 | 62 |
myotome | 6.35e-09 | 62 |
multilaminar epithelium | 9.80e-09 | 83 |
epithelial vesicle | 1.20e-08 | 78 |
muscle tissue | 2.95e-08 | 64 |
musculature | 2.95e-08 | 64 |
musculature of body | 2.95e-08 | 64 |
Showing 1 to 10 of 21 entries